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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4334469   DEAD-box ATP-dependent RNA helicase 27-like 
 zma-u.5   100501728   DEAD-box ATP-dependent RNA helicase 51 
 zma-u.5   103640803   DEAD-box ATP-dependent RNA helicase 27 
 ath-u.5   AT3G18600   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT5G65900   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100798885   DEAD-box ATP-dependent RNA helicase 27 
 gma-u.5   100798290   DEAD-box ATP-dependent RNA helicase 27 
 gma-u.5   100797375   DEAD-box ATP-dependent RNA helicase 27 
 sly-u.5   101245343   DEAD-box ATP-dependent RNA helicase 51 
 vvi-u.5   100242258   DEAD-box ATP-dependent RNA helicase 27 
 ppo-u.5   7468000   DEAD-box ATP-dependent RNA helicase 51 
 ppo-u.5   18102018   DEAD-box ATP-dependent RNA helicase 51-like 
 mtr-u.5   11438740   DEAD-box ATP-dependent RNA helicase 51 
 mtr-u.5   11441584   DEAD-box ATP-dependent RNA helicase 27 
 mtr-u.5   25486792   DEAD-box ATP-dependent RNA helicase 27 

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Top 50 coexpressed genes to 4334469 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334469 (osa-u.5 coexpression data)

CoexMap"4341211"


osaLOC4341211 | Entrez gene ID : 4341211      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 2 2 3 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (18 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (202 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (63 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2335 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3512 genes)  IEA  
Protein NP_001408541.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  mito 1,  cyto_mito 1  (predict for NP_001408541.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for NP_001408541.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4334469
zma-u.5
for
100501728
zma-u.5
for
103640803
ath-u.5
for
AT3G18600
ath-u.5
for
AT5G65900
gma-u.5
for
100798885
gma-u.5
for
100798290
gma-u.5
for
100797375
sly-u.5
for
101245343
vvi-u.5
for
100242258
ppo-u.5
for
7468000
ppo-u.5
for
18102018
mtr-u.5
for
11438740
mtr-u.5
for
11441584
mtr-u.5
for
25486792


Ortholog ID: 3222
Species osa hvu bdi zma sbi ath ath gma gma sly bra bra vvi ppo ppo mtr mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC4334469 LOC123399846 LOC104584763 LOC100501728 LOC8061145 AT5G65900 AT3G18600 LOC100798290 LOC100798885 LOC101245343 LOC103837961 LOC103859759 LOC100242258 LOC18102018 LOC7468000 LOC11438740 LOC11441584 LOC107926589 LOC107949736 LOC106412129 LOC106439550 LOC102597715 LOC102619669 LOC107794494 LOC107806417 CHLRE_07g314900v5
Function* DEAD-box ATP-dependent RNA helicase 27-like DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 27 DEA(D/H)-box RNA helicase family protein P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 51-like DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 27 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51-like DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 51 DEAD-box ATP-dependent RNA helicase 27 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4334469 123399846 104584763 100501728 8061145 836719 821391 100798290 100798885 101245343 103837961 103859759 100242258 18102018 7468000 11438740 11441584 107926589 107949736 106412129 106439550 102597715 102619669 107794494 107806417 5726525
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