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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4342960   UPF0235 protein At5g63440 
 osa-r.6   4342960   UPF0235 protein At5g63440 
 osa-m.8   4342960   UPF0235 protein At5g63440 
 osa-e.1   4342960   UPF0235 protein At5g63440 
 tae-r.2   123187518   UPF0235 protein At5g63440 
 tae-r.2   123043726   UPF0235 protein At5g63440 
 tae-r.2   123051582   UPF0235 protein At5g63440 
 hvu-r.1   123424746   UPF0235 protein At5g63440 
 bdi-r.1   100832887   UPF0235 protein At5g63440 
 zma-u.5   100193457   uncharacterized LOC100193457 
 sbi-r.1   110432206   UPF0235 protein At5g63440 
 ath-u.5   AT5G63440   hypothetical protein (DUF167) 
 gma-u.5   100306581   PWWP-DOMAIN INTERACTOR OF POLYCOMBS1-like 
 sly-u.5   101262801   UPF0235 protein At5g63440 
 bra-r.6   103873755   UPF0235 protein At5g63440 
 vvi-u.5   100247416   UPF0235 protein At5g63440 
 ppo-u.5   7463120   UPF0235 protein At5g63440 
 ppo-u.5   7484469   UPF0235 protein At5g63440 
 mtr-u.5   112417490   UPF0235 protein At5g63440 
 ghi-r.1   107886246   UPF0235 protein At5g63440 
 ghi-r.1   107950188   UPF0235 protein At5g63440 
 bna-r.1   106347910   UPF0235 protein At5g63440-like 
 bna-r.1   111208809   UPF0235 protein At5g63440 
 sot-r.1   102584183   UPF0235 protein At5g63440 
 cit-r.1   102608618   UPF0235 protein At5g63440 
 nta-r.1   107814906   UPF0235 protein At5g63440 
 nta-r.1   107782093   UPF0235 protein At5g63440 
 cre-r.1   CHLRE_12g485750v5   uncharacterized protein 

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Top 50 coexpressed genes to 4342960 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4342960 (osa-u.5 coexpression data)

CoexMap"4342960"


osaLOC4342960 | Entrez gene ID : 4342960    
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 1 1 1 1 1 1 1 1 1 2 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_015644648.1 [sequence] [blastp]
XP_015644649.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  cyto 2,  mito 2,  plas 2,  chlo_mito 2,  mito_plas 2,  cyto_plas 2  (predict for XP_015644648.1)
chlo 3,  nucl 2,  plas 2,  nucl_plas 2  (predict for XP_015644649.1)
Subcellular
localization
TargetP
other 9  (predict for XP_015644648.1)
other 8  (predict for XP_015644649.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4342960
osa-r.6
for
4342960
osa-m.8
for
4342960
osa-e.1
for
4342960
tae-r.2
for
123187518
tae-r.2
for
123043726
tae-r.2
for
123051582
hvu-r.1
for
123424746
bdi-r.1
for
100832887
zma-u.5
for
100193457
sbi-r.1
for
110432206
ath-u.5
for
AT5G63440
gma-u.5
for
100306581
sly-u.5
for
101262801
bra-r.6
for
103873755
vvi-u.5
for
100247416
ppo-u.5
for
7463120
ppo-u.5
for
7484469
mtr-u.5
for
112417490
ghi-r.1
for
107886246
ghi-r.1
for
107950188
bna-r.1
for
106347910
bna-r.1
for
111208809
sot-r.1
for
102584183
cit-r.1
for
102608618
nta-r.1
for
107814906
nta-r.1
for
107782093
cre-r.1
for
CHLRE_12g485750v5


Ortholog ID: 10415
Species osa tae tae tae hvu bdi zma sbi ath gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC4342960 LOC123187518 LOC123043726 LOC123051582 LOC123424746 LOC100832887 LOC100193457 LOC110432206 AT5G63440 LOC100306581 LOC101262801 LOC103873755 LOC100247416 LOC7463120 LOC7484469 LOC112417490 LOC107886246 LOC107950188 LOC106347910 LOC111208809 LOC102584183 LOC102608618 LOC107814906 LOC107782093 CHLRE_12g485750v5
Function* UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 uncharacterized LOC100193457 UPF0235 protein At5g63440 hypothetical protein (DUF167) PWWP-DOMAIN INTERACTOR OF POLYCOMBS1-like UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440-like UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03040 Spliceosome 6
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03040 Spliceosome 6
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit00190 Oxidative phosphorylation 4
cit04120 Ubiquitin mediated proteolysis 3
cit03420 Nucleotide excision repair 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 6
cre00190 Oxidative phosphorylation 6
cre04145 Phagosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4342960 123187518 123043726 123051582 123424746 100832887 100193457 110432206 836463 100306581 101262801 103873755 100247416 7463120 7484469 112417490 107886246 107950188 106347910 111208809 102584183 102608618 107814906 107782093 5716614
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