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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4345375   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like 
 osa-r.6   4345375   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like 
 osa-m.8   4345375   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like 
 osa-e.1   4345375   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like 
 zma-u.5   541870   chloroplast RNA splicing 1 
 ath-u.5   CRS1   maize chloroplast splicing factor-like protein 
 gma-u.5   100811938   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic 
 sly-u.5   101254358   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic 
 vvi-u.5   100256677   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic 
 ppo-u.5   112325673   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic 
 mtr-u.5   11427155   chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic 

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Top 50 coexpressed genes to 4345375 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4345375 (osa-u.5 coexpression data)

CoexMap"4345375"


osaLOC4345375 | Entrez gene ID : 4345375    
Species osa zma ath gma sly vvi ppo mtr tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000375 [list] [network] RNA splicing, via transesterification reactions  (174 genes)  IEA  
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (333 genes)  IEA  
Protein NP_001409472.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 3,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001409472.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001409472.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4345375

.
osa-r.6
for
4345375

.
osa-m.8
for
4345375

.
osa-e.1
for
4345375

.
zma-u.5
for
541870

.
ath-u.5
for
CRS1

.
gma-u.5
for
100811938

.
sly-u.5
for
101254358

.
vvi-u.5
for
100256677

.
ppo-u.5
for
112325673

.
mtr-u.5
for
11427155

.


Ortholog ID: 11409
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CRS1 LOC100811938 LOC101254358 LOC4345375 LOC541870 LOC103851031 LOC100256677 LOC112325673 LOC11427155 LOC123149835 LOC123161031 LOC123410824 LOC107912738 LOC107916688 LOC106354465 LOC106446230 LOC8069883 LOC102587090 LOC102630061 LOC100828512 LOC107795767 LOC107762063
Function* maize chloroplast splicing factor-like protein chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like chloroplast RNA splicing 1 chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831476 100811938 101254358 4345375 541870 103851031 100256677 112325673 11427155 123149835 123161031 123410824 107912738 107916688 106354465 106446230 8069883 102587090 102630061 100828512 107795767 107762063
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