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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4345664   polypyrimidine tract-binding protein homolog 1 
 osa-r.6   4345664   polypyrimidine tract-binding protein homolog 1 
 osa-m.8   4345664   polypyrimidine tract-binding protein homolog 1 
 osa-e.1   4345664   polypyrimidine tract-binding protein homolog 1 
 osa-u.5   4332960   polypyrimidine tract-binding protein homolog 1 
 zma-u.5   103653473   polypyrimidine tract-binding protein homolog 1 
 zma-u.5   100381791   uncharacterized LOC100381791 
 zma-u.5   100275742   uncharacterized LOC100275742 
 ath-u.5   PTB1   polypyrimidine tract-binding protein 1 
 gma-u.5   100792308   polypyrimidine tract-binding protein homolog 1 
 gma-u.5   100788927   polypyrimidine tract-binding protein homolog 1 
 sly-u.5   101251347   polypyrimidine tract-binding protein homolog 1 
 vvi-u.5   100266445   polypyrimidine tract-binding protein homolog 1 
 ppo-u.5   18097705   polypyrimidine tract-binding protein homolog 1 
 ppo-u.5   7495985   polypyrimidine tract-binding protein homolog 1 
 mtr-u.5   11420325   polypyrimidine tract-binding protein homolog 1 

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Top 50 coexpressed genes to 4345664 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4345664 (osa-u.5 coexpression data)

CoexMap"4345664"


osaLOC4345664 | Entrez gene ID : 4345664      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (29 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3003 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (333 genes)  IEA  
Protein XP_015649725.1 [sequence] [blastp]
XP_015649726.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for XP_015649725.1)
mito 4,  chlo 2,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_015649726.1)
Subcellular
localization
TargetP
other 4  (predict for XP_015649725.1)
other 4  (predict for XP_015649726.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4345664
osa-r.6
for
4345664
osa-m.8
for
4345664
osa-e.1
for
4345664
osa-u.5
for
4332960
zma-u.5
for
103653473
zma-u.5
for
100381791
zma-u.5
for
100275742
ath-u.5
for
PTB1
gma-u.5
for
100792308
gma-u.5
for
100788927
sly-u.5
for
101251347
vvi-u.5
for
100266445
ppo-u.5
for
18097705
ppo-u.5
for
7495985
mtr-u.5
for
11420325


Ortholog ID: 5515
Species osa osa tae tae hvu hvu bdi bdi zma zma sbi sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC4345664 LOC4332960 LOC123160611 LOC123097400 LOC123413547 LOC123448524 LOC100829820 LOC100836521 LOC100275742 LOC100381791 LOC8080760 LOC8075667 PTB1 LOC100788927 LOC100792308 LOC101251347 LOC103870954 LOC100266445 LOC18097705 LOC7495985 LOC11420325 LOC107890457 LOC107949175 LOC106453255 LOC125574894 PTB7 LOC102618721 LOC107804795 LOC107787487
Function* polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1-like polypyrimidine tract-binding protein homolog 1-like polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 uncharacterized LOC100275742 uncharacterized LOC100381791 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1-like polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 5
tae00620 Pyruvate metabolism 5
tae01200 Carbon metabolism 5
tae01230 Biosynthesis of amino acids 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
ath04141 Protein processing in endoplasmic reticulum 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
sot03040 Spliceosome 4
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4345664 4332960 123160611 123097400 123413547 123448524 100829820 100836521 100275742 100381791 8080760 8075667 821129 100788927 100792308 101251347 103870954 100266445 18097705 7495985 11420325 107890457 107949175 106453255 125574894 102580655 102618721 107804795 107787487
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