ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4346160	uncharacterized LOC4346160
osa-r.6	4346160	uncharacterized LOC4346160
osa-m.8	4346160	uncharacterized LOC4346160
osa-e.1	4346160	uncharacterized LOC4346160
osa-u.5	4347533	uncharacterized LOC4347533
tae-r.2	123112620	uncharacterized LOC123112620
tae-r.2	123151996	uncharacterized LOC123151996
hvu-r.1	123409984	uncharacterized LOC123409984
hvu-r.1	123399820	uncharacterized LOC123399820
bdi-r.1	100823798	uncharacterized LOC100823798
bdi-r.1	100820958	uncharacterized LOC100820958
zma-u.5	103632967	uncharacterized LOC103632967
zma-u.5	100278774	uncharacterized LOC100278774
sbi-r.1	8060597	uncharacterized LOC8060597
sbi-r.1	8058980	uncharacterized LOC8058980
ath-u.5	AT3G26890	meiosis chromosome segregation family protein
ath-u.5	AT5G41110	meiosis chromosome segregation family protein
gma-u.5	100806636	uncharacterized LOC100806636
gma-u.5	100819038	uncharacterized LOC100819038
gma-u.5	102661628	protein FAM214B
sly-u.5	101254883	uncharacterized LOC101254883
bra-r.6	103854287	uncharacterized LOC103854287
bra-r.6	103864055	protein FAM214A
bra-r.6	103875267	uncharacterized LOC103875267
vvi-u.5	100266395	uncharacterized LOC100266395
vvi-u.5	100256630	uncharacterized LOC100256630
ppo-u.5	7454588	uncharacterized LOC7454588
ppo-u.5	7454752	uncharacterized LOC7454752
ppo-u.5	7495813	uncharacterized LOC7495813
mtr-u.5	11440031	uncharacterized LOC11440031
mtr-u.5	11431161	uncharacterized LOC11431161
ghi-r.1	107948503	uncharacterized LOC107948503
ghi-r.1	107948511	uncharacterized LOC107948511
ghi-r.1	107949612	uncharacterized LOC107949612
bna-r.1	106347732	uncharacterized LOC106347732
bna-r.1	106446211	uncharacterized LOC106446211
bna-r.1	106435263	uncharacterized LOC106435263
sot-r.1	102593551	uncharacterized LOC102593551
cit-r.1	102610610	uncharacterized LOC102610610
cit-r.1	102610344	uncharacterized LOC102610344
nta-r.1	107791319	uncharacterized LOC107791319
nta-r.1	107828991	uncharacterized LOC107828991

Top 50 coexpressed genes to 4346160 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4346160 (osa-u.5 coexpression data)

CoexMap"4346160"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001390606.1 [sequence] [blastp]
NP_001390607.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5	(predict for NP_001390606.1)
nucl 9, cyto_nucl 5	(predict for NP_001390607.1)

Subcellular
localization
TargetP

chlo 6, other 3	(predict for NP_001390606.1)
chlo 6, other 3	(predict for NP_001390607.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4346160	osa-r.6 for 4346160	osa-m.8 for 4346160	osa-e.1 for 4346160	osa-u.5 for 4347533	tae-r.2 for 123112620	tae-r.2 for 123151996	hvu-r.1 for 123409984	hvu-r.1 for 123399820	bdi-r.1 for 100823798	bdi-r.1 for 100820958	zma-u.5 for 103632967	zma-u.5 for 100278774	sbi-r.1 for 8060597	sbi-r.1 for 8058980	ath-u.5 for AT3G26890	ath-u.5 for AT5G41110	gma-u.5 for 100806636	gma-u.5 for 100819038	gma-u.5 for 102661628	sly-u.5 for 101254883	bra-r.6 for 103854287	bra-r.6 for 103864055	bra-r.6 for 103875267	vvi-u.5 for 100266395	vvi-u.5 for 100256630	ppo-u.5 for 7454588	ppo-u.5 for 7454752	ppo-u.5 for 7495813	mtr-u.5 for 11440031	mtr-u.5 for 11431161	ghi-r.1 for 107948503	ghi-r.1 for 107948511	ghi-r.1 for 107949612	bna-r.1 for 106347732	bna-r.1 for 106446211	bna-r.1 for 106435263	sot-r.1 for 102593551	cit-r.1 for 102610610	cit-r.1 for 102610344	nta-r.1 for 107791319	nta-r.1 for 107828991

Ortholog

Ortholog ID: 3465

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC4346160

uncharacterized LOC4347533

uncharacterized LOC123163202

uncharacterized LOC123164446

uncharacterized LOC123104338

uncharacterized LOC123409984

uncharacterized LOC123399820

uncharacterized LOC100823798

uncharacterized LOC100820958

uncharacterized LOC103632967

uncharacterized LOC100278774

uncharacterized LOC8060597

uncharacterized LOC8058980

meiosis chromosome segregation family protein

uncharacterized LOC100806636

uncharacterized LOC100819038

uncharacterized LOC100793556

uncharacterized LOC101254883

uncharacterized LOC103854287

protein FAM214A

uncharacterized LOC103875267

uncharacterized LOC100266395

uncharacterized LOC100256630

uncharacterized LOC7454588

uncharacterized LOC7454752

uncharacterized LOC7495813

uncharacterized LOC11440031

uncharacterized LOC11431161

uncharacterized LOC107949612

uncharacterized LOC107937094

uncharacterized LOC107886188

uncharacterized LOC106446211

uncharacterized LOC106410263

uncharacterized BNAA02G28390D

uncharacterized LOC102593551

uncharacterized LOC102610610

uncharacterized LOC102610344

uncharacterized LOC107791319

uncharacterized LOC107828991

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00020	Citrate cycle (TCA cycle)	2
hvu00270	Cysteine and methionine metabolism	2
hvu00566	Sulfoquinovose metabolism	2
hvu00620	Pyruvate metabolism	2
hvu00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3
zma04142	Lysosome	3
zma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00760	Nicotinate and nicotinamide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00220	Arginine biosynthesis	3
bra00250	Alanine, aspartate and glutamate metabolism	3
bra00630	Glyoxylate and dicarboxylate metabolism	3
bra00910	Nitrogen metabolism	3
bra01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi03018	RNA degradation	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2
cit04145	Phagosome	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4
nta04814	Motor proteins	2
nta04075	Plant hormone signal transduction	2
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2
nta04075	Plant hormone signal transduction	2
nta00500	Starch and sucrose metabolism	2
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2

Expression

Expression pattern

Entrez Gene ID^*

4346160

4347533

123163202

123164446

123104338

123409984

123399820

100823798

100820958

103632967

100278774

8060597

8058980

822305

834113

100806636

100819038

100793556

101254883

103854287

103864055

103875267

100266395

100256630

7454588

7454752

7495813

11440031

11431161

107949612

107937094

107886188

106446211

106410263

106402188

102593551

102610610

102610344

107791319

107828991

The preparation time of this page was 0.3 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	2	2	2	2	2	2	3	1	3	2	3	2	3	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4346160 (osa-u.5 coexpression data)

Top 50 enrichment test to 4346160 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**