ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4348871	DExH-box ATP-dependent RNA helicase DExH1
osa-r.6	4348871	DExH-box ATP-dependent RNA helicase DExH1
osa-e.1	4348871	DExH-box ATP-dependent RNA helicase DExH1
zma-u.5	103643471	DExH-box ATP-dependent RNA helicase DExH1
ath-u.5	AT2G35920	RNA helicase family protein
gma-u.5	100792823	DExH-box ATP-dependent RNA helicase DExH1
gma-u.5	100792623	DExH-box ATP-dependent RNA helicase DExH1
sly-u.5	101264453	DExH-box ATP-dependent RNA helicase DExH1
vvi-u.5	100252028	DExH-box ATP-dependent RNA helicase DExH1
ppo-u.5	7469944	DExH-box ATP-dependent RNA helicase DExH1
mtr-u.5	11424426	DExH-box ATP-dependent RNA helicase DExH1

functional annotation

KEGG

osa03018 [list] [network] RNA degradation (114 genes)

GO BP

GO CC

GO:0005622 [list] [network] intracellular anatomical structure

(8079 genes)

IEA

GO MF

GO:0004386 [list] [network] helicase activity	(146 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1223 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2335 genes)	IEA

Protein

XP_025876436.2 [sequence] [blastp]
XP_066161009.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, chlo_mito 5	(predict for XP_025876436.2)
cyto 4, nucl 2, cyto_pero 2, cyto_plas 2	(predict for XP_066161009.1)

Subcellular
localization
TargetP

mito 7, chlo 3	(predict for XP_025876436.2)
other 8	(predict for XP_066161009.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4348871	osa-r.6 for 4348871	osa-e.1 for 4348871	zma-u.5 for 103643471	ath-u.5 for AT2G35920	gma-u.5 for 100792823	gma-u.5 for 100792623	sly-u.5 for 101264453	vvi-u.5 for 100252028	ppo-u.5 for 7469944	mtr-u.5 for 11424426

Ortholog ID: 8904

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

DExH-box ATP-dependent RNA helicase DExH1

RNA helicase family protein

DExH-box ATP-dependent RNA helicase DExH1

DExH-box ATP-dependent RNA helicase DExH1-like

DExH-box ATP-dependent RNA helicase DExH1

ATP-dependent RNA helicase DHX36

DExH-box ATP-dependent RNA helicase DExH1

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	5
tae03018	RNA degradation	4
tae03082	ATP-dependent chromatin remodeling	3
tae03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	4
zma03018	RNA degradation	3
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	3
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly03015	mRNA surveillance pathway	3
sly03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	7
bra03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	4
ppo03018	RNA degradation	3
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	8
ghi04075	Plant hormone signal transduction	8
ghi04626	Plant-pathogen interaction	4
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	10
ghi04626	Plant-pathogen interaction	6
ghi03013	Nucleocytoplasmic transport	4
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	13
bna03018	RNA degradation	2
bna03030	DNA replication	2
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	13
bna03018	RNA degradation	2
bna03030	DNA replication	2
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	3
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

4348871

123045164

123181008

123430684

100834725

103643471

8070497

818165

100792623

100792823

101264453

103857598

100252028

7469944

11424426

107899406

107948284

125606449

106388140

102584740

102628348

107798029

107787244

5728925

5726131

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4348871 (osa-u.5 coexpression data)

Top 50 enrichment test to 4348871 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4348871 (osa-u.5 coexpression data)

Top 50 enrichment test to 4348871 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**