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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4352436   riboflavin synthase 
 osa-r.6   4352436   riboflavin synthase 
 osa-e.1   4352436   riboflavin synthase 
 tae-r.2   123110810   riboflavin synthase 
 tae-r.2   123119809   riboflavin synthase 
 tae-r.2   123102625   riboflavin synthase 
 hvu-r.1   123397747   riboflavin synthase 
 bdi-r.1   100840951   riboflavin synthase 
 zma-u.5   100284485   riboflavin synthase alpha chain 
 zma-u.5   100282978   Riboflavin synthase alpha chain 
 sbi-r.1   110429643   riboflavin synthase 
 ath-u.5   AT2G20690   lumazine-binding family protein 
 gma-u.5   100809163   riboflavin synthase 
 sly-u.5   101265745   riboflavin synthase 
 bra-r.6   103828149   riboflavin synthase 
 vvi-u.5   100257400   riboflavin synthase 
 ppo-u.5   18108559   riboflavin synthase 
 ppo-u.5   18104638   riboflavin synthase 
 mtr-u.5   25484049   riboflavin synthase 
 mtr-u.5   25479437   riboflavin synthase 
 ghi-r.1   107891252   riboflavin synthase 
 ghi-r.1   107889498   riboflavin synthase 
 bna-r.1   106380680   riboflavin synthase 
 bna-r.1   106357539   riboflavin synthase-like 
 sot-r.1   102598979   riboflavin synthase 
 cit-r.1   102620733   riboflavin synthase 
 nta-r.1   107796682   riboflavin synthase 
 nta-r.1   107825203   riboflavin synthase 
 cre-r.1   CHLRE_06g296600v5   uncharacterized protein 

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Top 50 coexpressed genes to 4352436 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4352436 (osa-u.5 coexpression data)

CoexMap"4352436"


osaLOC4352436 | Entrez gene ID : 4352436      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 1 1 2 1 1 1 1 1 1 2 2 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00740 [list] [network] Riboflavin metabolism (19 genes)
osa01240 [list] [network] Biosynthesis of cofactors (253 genes)
GO BP
GO:0009231 [list] [network] riboflavin biosynthetic process  (12 genes)  IEA  
GO CC
GO MF
GO:0004746 [list] [network] riboflavin synthase activity  (1 genes)  IEA  
Protein XP_015618419.1 [sequence] [blastp]
XP_015618420.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_015618419.1)
chlo 10  (predict for XP_015618420.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_015618419.1)
chlo 9  (predict for XP_015618420.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4352436
osa-r.6
for
4352436
osa-e.1
for
4352436
tae-r.2
for
123110810
tae-r.2
for
123119809
tae-r.2
for
123102625
hvu-r.1
for
123397747
bdi-r.1
for
100840951
zma-u.5
for
100284485
zma-u.5
for
100282978
sbi-r.1
for
110429643
ath-u.5
for
AT2G20690
gma-u.5
for
100809163
sly-u.5
for
101265745
bra-r.6
for
103828149
vvi-u.5
for
100257400
ppo-u.5
for
18108559
ppo-u.5
for
18104638
mtr-u.5
for
25484049
mtr-u.5
for
25479437
ghi-r.1
for
107891252
ghi-r.1
for
107889498
bna-r.1
for
106380680
bna-r.1
for
106357539
sot-r.1
for
102598979
cit-r.1
for
102620733
nta-r.1
for
107796682
nta-r.1
for
107825203
cre-r.1
for
CHLRE_06g296600v5


Ortholog ID: 8880
Species osa tae tae tae hvu bdi zma zma sbi ath gma sly bra vvi ppo ppo mtr mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC4352436 LOC123110810 LOC123119809 LOC123102625 LOC123397747 LOC100840951 LOC100284485 LOC100282978 LOC110429643 AT2G20690 LOC100809163 LOC101265745 LOC103828149 LOC100257400 LOC18108559 LOC18104638 LOC25484049 LOC25479437 LOC107891252 LOC107889498 LOC106380680 LOC106357539 LOC102598979 LOC102620733 LOC107796682 LOC107825203 CHLRE_06g296600v5
Function* riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase alpha chain Riboflavin synthase alpha chain riboflavin synthase lumazine-binding family protein riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase-like riboflavin synthase riboflavin synthase riboflavin synthase riboflavin synthase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 4
osa00860 Porphyrin metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 5
zma04145 Phagosome 5
zma04075 Plant hormone signal transduction 4
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma01240 Biosynthesis of cofactors 3
zma00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
gma01240 Biosynthesis of cofactors 3
gma00030 Pentose phosphate pathway 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 4
sly01200 Carbon metabolism 4
sly00190 Oxidative phosphorylation 4
sly00020 Citrate cycle (TCA cycle) 3
sly00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 4
vvi03010 Ribosome 2
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00740 Riboflavin metabolism 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo01240 Biosynthesis of cofactors 4
ppo00740 Riboflavin metabolism 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 6
mtr01240 Biosynthesis of cofactors 6
mtr00790 Folate biosynthesis 2
mtr00940 Phenylpropanoid biosynthesis 2
mtr00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi01240 Biosynthesis of cofactors 4
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi01240 Biosynthesis of cofactors 4
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00660 C5-Branched dibasic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00660 C5-Branched dibasic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot00740 Riboflavin metabolism 2
sot01230 Biosynthesis of amino acids 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03018 RNA degradation 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03018 RNA degradation 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4352436 123110810 123119809 123102625 123397747 100840951 100284485 100282978 110429643 816597 100809163 101265745 103828149 100257400 18108559 18104638 25484049 25479437 107891252 107889498 106380680 106357539 102598979 102620733 107796682 107825203 5717048
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