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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4352778   nuclear transcription factor Y subunit A-7 
 osa-r.6   4352778   nuclear transcription factor Y subunit A-7 
 osa-m.8   4352778   nuclear transcription factor Y subunit A-7 
 osa-e.1   4352778   nuclear transcription factor Y subunit A-7 
 osa-u.5   4344874   nuclear transcription factor Y subunit A-4 
 zma-u.5   100194365   uncharacterized LOC100194365 
 zma-u.5   100383246   uncharacterized LOC100383246 
 zma-u.5   100284857   uncharacterized LOC100284857 
 ath-u.5   NF-YA4   nuclear factor Y, subunit A4 
 ath-u.5   NF-YA7   nuclear factor Y, subunit A7 
 gma-u.5   100499754   putative CCAAT-binding transcription factor 
 gma-u.5   NF-YA08   nuclear transcription factor Y subunit A-8 
 gma-u.5   NF-YA04   nuclear transcription factor Y subunit A-4 
 sly-u.5   101260988   nuclear transcription factor Y subunit A-7 
 vvi-u.5   100249692   nuclear transcription factor Y subunit A-7 
 ppo-u.5   18103293   nuclear transcription factor Y subunit A-7 
 ppo-u.5   7487567   nuclear transcription factor Y subunit A-7 
 mtr-u.5   11413865   nuclear transcription factor Y subunit A-7 

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Top 50 coexpressed genes to 4352778 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4352778 (osa-u.5 coexpression data)

CoexMap"4352778"


osaLOC4352778 | Entrez gene ID : 4352778      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 2 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (380 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (17 genes)  IEA  
GO MF
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (257 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1843 genes)  IEA  
Protein XP_015618404.1 [sequence] [blastp]
XP_015618405.1 [sequence] [blastp]
XP_015618407.1 [sequence] [blastp]
XP_015618408.1 [sequence] [blastp]
XP_066162558.1 [sequence] [blastp]
XP_066162559.1 [sequence] [blastp]
XP_066162560.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_015618404.1)
nucl 10  (predict for XP_015618405.1)
nucl 10  (predict for XP_015618407.1)
nucl 10  (predict for XP_015618408.1)
nucl 10  (predict for XP_066162558.1)
nucl 10  (predict for XP_066162559.1)
nucl 10  (predict for XP_066162560.1)
Subcellular
localization
TargetP
other 8  (predict for XP_015618404.1)
other 8  (predict for XP_015618405.1)
other 8  (predict for XP_015618407.1)
other 8  (predict for XP_015618408.1)
other 8  (predict for XP_066162558.1)
other 8  (predict for XP_066162559.1)
other 8  (predict for XP_066162560.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4352778
osa-r.6
for
4352778
osa-m.8
for
4352778
osa-e.1
for
4352778
osa-u.5
for
4344874
zma-u.5
for
100194365
zma-u.5
for
100383246
zma-u.5
for
100284857
ath-u.5
for
NF-YA4
ath-u.5
for
NF-YA7
gma-u.5
for
100499754
gma-u.5
for
NF-YA08
gma-u.5
for
NF-YA04
sly-u.5
for
101260988
vvi-u.5
for
100249692
ppo-u.5
for
18103293
ppo-u.5
for
7487567
mtr-u.5
for
11413865


Ortholog ID: 3914
Species osa osa tae tae hvu hvu bdi bdi zma zma sbi sbi ath ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot sot cit nta nta
Symbol LOC4352778 LOC4344874 LOC123119379 LOC100037532 LOC123449586 LOC123396343 LOC100842793 LOC100844028 LOC100383246 LOC100194365 LOC8070158 LOC8059799 NF-YA4 NF-YA7 LOC100499754 NF-YA16 LOC101260988 LOC103867423 LOC103840389 LOC100249692 LOC7487567 LOC18103293 LOC11413865 LOC107906314 LOC107924915 LOC106367269 LOC125600621 LOC102600275 LOC102579930 LOC102608084 LOC107787566 LOC107807858
Function* nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 uncharacterized LOC100383246 uncharacterized LOC100194365 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear factor Y, subunit A4 nuclear factor Y, subunit A7 putative CCAAT-binding transcription factor nuclear transcription factor Y subunit A-16 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 3
ath00566 Sulfoquinovose metabolism 3
ath00740 Riboflavin metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 3
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 9
ppo04626 Plant-pathogen interaction 4
ppo03040 Spliceosome 3
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 3
bna00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4352778 4344874 123119379 100037532 123449586 123396343 100842793 100844028 100383246 100194365 8070158 8059799 818037 839929 100499754 100809036 101260988 103867423 103840389 100249692 7487567 18103293 11413865 107906314 107924915 106367269 125600621 102600275 102579930 102608084 107787566 107807858
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