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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RTFL12   ROTUNDIFOLIA like 12 
 ath-r.7   RTFL12   ROTUNDIFOLIA like 12 
 ath-e.2   RTFL12   ROTUNDIFOLIA like 12 
 bra-r.6   103833396   uncharacterized LOC103833396 
 bna-r.1   106433139   small polypeptide DEVIL 9 
 bna-r.1   106378185   uncharacterized LOC106378185 
 ghi-r.1   121217479   uncharacterized LOC121217479 
 gma-u.5   106795224   uncharacterized LOC106795224 
 zma-u.5   100275904   ROTUNDIFOLIA like 12 
 hvu-r.1   123408081   small polypeptide DEVIL 17-like 
 sbi-r.1   8080960   uncharacterized LOC8080960 
 bdi-r.1   100840918   uncharacterized LOC100840918 

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Top 50 coexpressed genes to RTFL12 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RTFL12 (ath-u.5 coexpression data)

CoexMap"5008138"


athRTFL12 | Entrez gene ID : 5008138      
Species ath bra bna ghi gma zma hvu sbi bdi cre vvi ppo mtr nta tae osa sly cit sot
Paralog 3 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008285 [list] [network] negative regulation of cell population proliferation  (42 genes)  ISS  
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0048367 [list] [network] shoot system development  (800 genes)  ISS  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISS  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001078384.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001078384.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for NP_001078384.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RTFL12
ath-r.7
for
RTFL12
ath-e.2
for
RTFL12
bra-r.6
for
103833396
bna-r.1
for
106433139
bna-r.1
for
106378185
ghi-r.1
for
121217479
gma-u.5
for
106795224
zma-u.5
for
100275904
hvu-r.1
for
123408081
sbi-r.1
for
8080960
bdi-r.1
for
100840918


Ortholog ID: 13494
Species ath bra bna bna ghi gma zma tae hvu sbi bdi
Symbol RTFL12 LOC103833396 LOC106433139 LOC106378185 LOC121217479 LOC106795224 LOC100275904 LOC123058013 LOC123408081 LOC8080960 LOC100840918
Function* ROTUNDIFOLIA like 12 uncharacterized LOC103833396 small polypeptide DEVIL 9 uncharacterized LOC106378185 uncharacterized LOC121217479 uncharacterized LOC106795224 ROTUNDIFOLIA like 12 small polypeptide DEVIL 10 small polypeptide DEVIL 17-like uncharacterized LOC8080960 uncharacterized LOC100840918
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 7
bra00270 Cysteine and methionine metabolism 3
bra00480 Glutathione metabolism 3
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 2
zma01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00260 Glycine, serine and threonine metabolism 2
hvu00350 Tyrosine metabolism 2
hvu00360 Phenylalanine metabolism 2
hvu00410 beta-Alanine metabolism 2
hvu00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5008138 103833396 106433139 106378185 121217479 106795224 100275904 123058013 123408081 8080960 100840918
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