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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542009   OCL4 protein 
 zma-r.6   542009   OCL4 protein 
 zma-m.5   542009   OCL4 protein 
 osa-u.5   4349488   homeobox-leucine zipper protein ROC3-like 
 ath-u.5   HB-7   homeobox-7 
 gma-u.5   100812829   homeobox-leucine zipper protein ROC3 
 gma-u.5   100793658   homeobox-leucine zipper protein HDG5-like 
 sly-u.5   101250616   homeobox-leucine zipper protein HDG5 
 vvi-u.5   100253940   homeobox-leucine zipper protein ROC3-like 
 ppo-u.5   7491879   homeobox-leucine zipper protein HDG5 
 mtr-u.5   11421096   homeobox-leucine zipper protein ROC3 

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Top 50 coexpressed genes to 542009 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542009 (zma-u.5 coexpression data)

CoexMap"542009"


zmaLOC542009 | Entrez gene ID : 542009      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO MF
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (224 genes)  IEA  
GO:0008289 [list] [network] lipid binding  (304 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2288 genes)  IEA  
Protein NP_001337805.1 [sequence] [blastp]
XP_008648322.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001337805.1)
nucl 9  (predict for XP_008648322.1)
Subcellular
localization
TargetP
scret 4,  chlo 4  (predict for NP_001337805.1)
scret 4,  chlo 4  (predict for XP_008648322.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542009

.
zma-r.6
for
542009

.
zma-m.5
for
542009

.
osa-u.5
for
4349488

.
ath-u.5
for
HB-7

.
gma-u.5
for
100812829

.
gma-u.5
for
100793658

.
sly-u.5
for
101250616

.
vvi-u.5
for
100253940

.
ppo-u.5
for
7491879

.
mtr-u.5
for
11421096

.


Ortholog ID: 7751
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol HB-7 LOC100812829 LOC100793658 LOC101250616 LOC4349488 LOC542009 LOC103839568 LOC103827691 LOC100253940 LOC7491879 LOC11421096 LOC123125908 LOC123181469 LOC123436237 LOC107938594 LOC107938596 LOC111198492 LOC106366839 LOC8055599 LOC102587397 LOC102612036 LOC100840138 LOC107775556 LOC107814013
Function* homeobox-7 homeobox-leucine zipper protein ROC3 homeobox-leucine zipper protein HDG5-like homeobox-leucine zipper protein HDG5 homeobox-leucine zipper protein ROC3-like OCL4 protein homeobox-leucine zipper protein HDG5 homeobox-leucine zipper protein HDG5 homeobox-leucine zipper protein ROC3-like homeobox-leucine zipper protein HDG5 homeobox-leucine zipper protein ROC3 homeobox-leucine zipper protein ROC3 homeobox-leucine zipper protein ROC3 homeobox-leucine zipper protein ROC3 homeobox-leucine zipper protein HDG5-like homeobox-leucine zipper protein HDG5 homeobox-leucine zipper protein HDG5 homeobox-leucine zipper protein HDG5 homeobox-leucine zipper protein ROC3 homeobox-leucine zipper protein HDG5 homeobox-leucine zipper protein HDG5 homeobox-leucine zipper protein ROC3 homeobox-leucine zipper protein ROC3 homeobox-leucine zipper protein HDG5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 5
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 2
hvu01200 Carbon metabolism 2
hvu00240 Pyrimidine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00062 Fatty acid elongation 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 3
cit00062 Fatty acid elongation 2
cit04626 Plant-pathogen interaction 2
cit04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 2
nta00071 Fatty acid degradation 2
nta01212 Fatty acid metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 6
nta04981 Folate transport and metabolism 4
nta00062 Fatty acid elongation 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834733 100812829 100793658 101250616 4349488 542009 103839568 103827691 100253940 7491879 11421096 123125908 123181469 123436237 107938594 107938596 111198492 106366839 8055599 102587397 102612036 100840138 107775556 107814013
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