ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	542138	scarecrow-like protein 23
zma-r.6	542138	scarecrow-like protein 23
osa-u.5	4343637	scarecrow-like protein 23
ath-u.5	AT5G41920	GRAS family transcription factor
gma-u.5	100816249	scarecrow-like protein 23
gma-u.5	100815217	scarecrow-like protein 23
sly-u.5	101256307	scarecrow-like protein 23
vvi-u.5	100854772	scarecrow-like protein 23
ppo-u.5	7495639	scarecrow-like protein 23
ppo-u.5	7453725	scarecrow-like protein 23
mtr-u.5	11442833	scarecrow-like protein 23

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001292780.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 2, nucl 1, mito 1, cysk 1, cysk_nucl 1

(predict for NP_001292780.1)

Subcellular
localization
TargetP

chlo 4, other 3

(predict for NP_001292780.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 542138	zma-r.6 for 542138	osa-u.5 for 4343637	ath-u.5 for AT5G41920	gma-u.5 for 100816249	gma-u.5 for 100815217	sly-u.5 for 101256307	vvi-u.5 for 100854772	ppo-u.5 for 7495639	ppo-u.5 for 7453725	mtr-u.5 for 11442833

Ortholog ID: 9712

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

scarecrow-like protein 23

GRAS family transcription factor

scarecrow-like protein 23

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2
ath00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00900	Terpenoid backbone biosynthesis	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2
vvi00071	Fatty acid degradation	2
vvi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

542138

8056354

4343637

123052377

123044515

123425660

100829345

834197

100815217

100816249

101256307

103864129

100854772

7453725

7495639

11442833

107950277

107915480

125607961

106373514

102600621

102622768

107802934

107759968

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 542138 (zma-u.5 coexpression data)

Top 50 enrichment test to 542138 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	1	1	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 542138 (zma-u.5 coexpression data)

Top 50 enrichment test to 542138 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**