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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542270   cell division control protein2 homolog 
 zma-r.6   542270   cell division control protein2 homolog 
 zma-m.5   542270   cell division control protein2 homolog 
 zma-u.5   100284730   uncharacterized LOC100284730 
 zma-u.5   100273306   uncharacterized LOC100273306 
 osa-u.5   4331415   cyclin-dependent kinase A-1-like 
 osa-u.5   4328135   cyclin-dependent kinase A-2-like 
 osa-u.5   4331341   cyclin-dependent kinase A-1-like 
 ath-u.5   CDC2   cell division control 2 
 gma-u.5   100127418   p34cdc2 protein kinase 
 gma-u.5   100780359   cell division control protein 2 homolog 
 gma-u.5   100782865   p34cdc2 protein kinase 
 sly-u.5   CDKA1   cyclin-dependent protein kinase cdc2A-1 
 sly-u.5   cdc2A-2   cyclin-dependent protein kinase p34cdc2 
 sly-u.5   101248452   cell division control protein 2 homolog 
 vvi-u.5   100262312   cell division control protein 2 homolog 
 ppo-u.5   7472581   cell division control protein 2 homolog A 
 mtr-u.5   25493338   cell division control protein 2 homolog 2 
 mtr-u.5   25486353   cell division control protein 2 homolog 1 

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Top 50 coexpressed genes to 542270 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542270 (zma-u.5 coexpression data)

CoexMap"542270"


zmaLOC542270 | Entrez gene ID : 542270      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 1 3 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051445 [list] [network] regulation of meiotic cell cycle  (7 genes)  IEA  
GO:0000082 [list] [network] G1/S transition of mitotic cell cycle  (12 genes)  IEA  
GO:0010389 [list] [network] regulation of G2/M transition of mitotic cell cycle  (26 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (710 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (1372 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (2389 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (44 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
GO:0004693 [list] [network] cyclin-dependent protein serine/threonine kinase activity  (14 genes)  IEA  
GO:0030332 [list] [network] cyclin binding  (14 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2473 genes)  IEA  
Protein NP_001105342.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  cyto_E.R. 4,  extr 1,  cysk 1  (predict for NP_001105342.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001105342.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542270

.
zma-r.6
for
542270

.
zma-m.5
for
542270

.
zma-u.5
for
100284730

.
zma-u.5
for
100273306

.
osa-u.5
for
4331415

.
osa-u.5
for
4328135

.
osa-u.5
for
4331341

.
ath-u.5
for
CDC2

.
gma-u.5
for
100127418

.
gma-u.5
for
100780359

.
gma-u.5
for
100782865

.
sly-u.5
for
CDKA1

.
sly-u.5
for
cdc2A-2

.
sly-u.5
for
101248452

.
vvi-u.5
for
100262312

.
ppo-u.5
for
7472581

.
mtr-u.5
for
25493338

.
mtr-u.5
for
25486353

.


Ortholog ID: 3234
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol CDC2 LOC100782865 LOC100780359 CDKA1 cdc2A-2 LOC4331341 LOC4331415 LOC100284730 LOC542270 LOC103874842 LOC103873117 LOC100262312 LOC7472581 LOC25486353 LOC25493338 LOC123093815 LOC123099045 LOC123449909 LOC123401283 LOC107901746 LOC107962177 LOC106430818 LOC106368132 CHLRE_10g465900v5 LOC8059476 LOC8068271 LOC102582575 LOC102598342 LOC102611219 LOC100829615 LOC100821247 LOC107821076 LOC107818324
Function* cell division control 2 p34cdc2 protein kinase cell division control protein 2 homolog cyclin-dependent protein kinase cdc2A-1 cyclin-dependent protein kinase p34cdc2 cyclin-dependent kinase A-1-like cyclin-dependent kinase A-1-like uncharacterized LOC100284730 cell division control protein2 homolog cyclin-dependent kinase A-1 cyclin-dependent kinase A-1 cell division control protein 2 homolog cell division control protein 2 homolog A cell division control protein 2 homolog 1 cell division control protein 2 homolog 2 cyclin-dependent kinase A-1 cyclin-dependent kinase A-1 cyclin-dependent kinase A-1 cyclin-dependent kinase A-2 cell division control protein 2 homolog A cell division control protein 2 homolog A cyclin-dependent kinase A-1 cyclin-dependent kinase A-1 uncharacterized protein cell division control protein 2 homolog cyclin-dependent kinase A-2 cell division control protein 2 homolog A-like cell division control protein 2 homolog A cell division control protein 2 homolog cyclin-dependent kinase A-2 cyclin-dependent kinase A-1 cell division control protein 2 homolog cell division control protein 2 homolog A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00270 Cysteine and methionine metabolism 4
ath00966 Glucosinolate biosynthesis 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath03008 Ribosome biogenesis in eukaryotes 3
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma00510 N-Glycan biosynthesis 3
gma00513 Various types of N-glycan biosynthesis 3
gma03010 Ribosome 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 5
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 6
zma00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 2
bra00513 Various types of N-glycan biosynthesis 2
bra04141 Protein processing in endoplasmic reticulum 2
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi03018 RNA degradation 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo04814 Motor proteins 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr04145 Phagosome 4
mtr04142 Lysosome 3
mtr04144 Endocytosis 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
hvu04075 Plant hormone signal transduction 2
hvu04626 Plant-pathogen interaction 2
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu00785 Lipoic acid metabolism 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 10
cre03410 Base excision repair 7
cre03420 Nucleotide excision repair 7
cre03430 Mismatch repair 7
cre00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04144 Endocytosis 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824036 100782865 100780359 544139 544140 4331341 4331415 100284730 542270 103874842 103873117 100262312 7472581 25486353 25493338 123093815 123099045 123449909 123401283 107901746 107962177 106430818 106368132 5724190 8059476 8068271 102582575 102598342 102611219 100829615 100821247 107821076 107818324
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