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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542325   AGAMOUS homolog 2 
 zma-r.6   542325   AGAMOUS homolog 2 
 zma-m.5   542325   AGAMOUS homolog 2 
 zma-u.5   542326   MADS1 
 osa-u.5   4351753   MADS-box transcription factor 13-like 

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Top 50 coexpressed genes to 542325 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542325 (zma-u.5 coexpression data)

CoexMap"542325"


zmaLOC542325 | Entrez gene ID : 542325      
Species zma osa sly bna ghi gma sbi nta mtr cre bra cit vvi ppo hvu bdi sot tae ath
Paralog 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (124 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (246 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (663 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
Protein NP_001105378.2 [sequence] [blastp]
NP_001292923.1 [sequence] [blastp]
XP_008673430.1 [sequence] [blastp]
XP_008673432.1 [sequence] [blastp]
XP_020405641.1 [sequence] [blastp]
XP_023157716.1 [sequence] [blastp]
XP_035821987.1 [sequence] [blastp]
XP_035821988.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001105378.2)
nucl 8,  cyto 2  (predict for NP_001292923.1)
nucl 8,  cyto 2  (predict for XP_008673430.1)
nucl 10  (predict for XP_008673432.1)
nucl 8,  cyto 2  (predict for XP_020405641.1)
nucl 6,  cyto 1,  chlo 1,  plas 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_023157716.1)
nucl 10  (predict for XP_035821987.1)
nucl 10  (predict for XP_035821988.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_001105378.2)
other 5,  chlo 3  (predict for NP_001292923.1)
other 5,  chlo 3  (predict for XP_008673430.1)
other 8,  mito 4  (predict for XP_008673432.1)
other 5,  chlo 3  (predict for XP_020405641.1)
other 5,  chlo 3  (predict for XP_023157716.1)
other 8,  mito 4  (predict for XP_035821987.1)
other 8,  mito 4  (predict for XP_035821988.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542325

.
zma-r.6
for
542325

.
zma-m.5
for
542325

.
zma-u.5
for
542326

.
osa-u.5
for
4351753

.


Ortholog ID: 16131
Species osa zma zma tae tae bdi
Symbol LOC4351753 LOC542325 LOC542326 LOC123119942 LOC123110996 MADS2
Function* MADS-box transcription factor 13-like AGAMOUS homolog 2 MADS1 MADS-box transcription factor 13 MADS-box transcription factor 13 MADS-box transcription factor 13-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 2
bdi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4351753 542325 542326 123119942 123110996 100836399
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