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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542374   malate dehydrogenase 6 
 zma-r.6   542374   malate dehydrogenase 6 
 zma-m.5   542374   malate dehydrogenase 6 
 osa-u.5   4346332   malate dehydrogenase [NADP], chloroplastic 
 ath-u.5   AT5G58330   lactate/malate dehydrogenase family protein 
 gma-u.5   100782567   malate dehydrogenase [NADP], chloroplastic 
 gma-u.5   100305890   malate dehydrogenase [NADP], chloroplastic 
 sly-u.5   mdh   malate dehydrogenase 
 sly-u.5   chMDH   chloroplast malate dehydrogenase 
 vvi-u.5   100247974   malate dehydrogenase [NADP], chloroplastic 
 ppo-u.5   7479845   malate dehydrogenase [NADP], chloroplastic 
 mtr-u.5   25484827   malate dehydrogenase [NADP], chloroplastic 

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Top 50 coexpressed genes to 542374 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542374 (zma-u.5 coexpression data)

CoexMap"542374"


zmaLOC542374 | Entrez gene ID : 542374      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00620 [list] [network] Pyruvate metabolism (118 genes)
zma00710 [list] [network] Carbon fixation by Calvin cycle (108 genes)
zma01200 [list] [network] Carbon metabolism (344 genes)
GO BP
GO:0006108 [list] [network] malate metabolic process  (27 genes)  IEA  
GO CC
GO MF
GO:0046554 [list] [network] L-malate dehydrogenase (NADP+) activity  (1 genes)  IEA  
Protein NP_001358550.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001358550.1)
Subcellular
localization
TargetP
chlo 9,  mito 3  (predict for NP_001358550.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542374
zma-r.6
for
542374
zma-m.5
for
542374
osa-u.5
for
4346332
ath-u.5
for
AT5G58330
gma-u.5
for
100782567
gma-u.5
for
100305890
sly-u.5
for
mdh
sly-u.5
for
chMDH
vvi-u.5
for
100247974
ppo-u.5
for
7479845
mtr-u.5
for
25484827


Ortholog ID: 5394
Species zma sbi sbi osa tae tae hvu bdi ath gma gma sly sly bra bra vvi ppo mtr ghi ghi bna bna sot cit nta cre
Symbol LOC542374 LOC110436993 LOC8057802 LOC4346332 LOC123165753 LOC123101856 LOC123411341 LOC100837587 AT5G58330 LOC100305890 LOC100782567 chMDH mdh LOC103856701 LOC103851645 LOC100247974 LOC7479845 LOC25484827 LOC107904294 LOC107943658 LOC106388230 LOC106435080 LOC102582818 LOC102622984 LOC107778629 CHLRE_09g410700v5
Function* malate dehydrogenase 6 malate dehydrogenase [NADP] 2, chloroplastic malate dehydrogenase [NADP] 1, chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP] 1, chloroplastic malate dehydrogenase [NADP], chloroplastic-like malate dehydrogenase [NADP] 1, chloroplastic-like malate dehydrogenase [NADP], chloroplastic lactate/malate dehydrogenase family protein malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic chloroplast malate dehydrogenase malate dehydrogenase malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic-like malate dehydrogenase [NADP], chloroplastic-like malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma00010 Glycolysis / Gluconeogenesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 7
tae00620 Pyruvate metabolism 2
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00900 Terpenoid backbone biosynthesis 2
bdi04146 Peroxisome 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 12
ath00710 Carbon fixation by Calvin cycle 7
ath00630 Glyoxylate and dicarboxylate metabolism 6
ath00260 Glycine, serine and threonine metabolism 3
ath01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00620 Pyruvate metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma00710 Carbon fixation by Calvin cycle 3
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma03010 Ribosome 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00195 Photosynthesis 4
sly00710 Carbon fixation by Calvin cycle 4
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra04146 Peroxisome 2
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 9
vvi00710 Carbon fixation by Calvin cycle 6
vvi01240 Biosynthesis of cofactors 3
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 4
ppo01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 3
ghi00195 Photosynthesis 3
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 3
ghi00195 Photosynthesis 3
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 5
bna00710 Carbon fixation by Calvin cycle 5
bna01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 5
bna00710 Carbon fixation by Calvin cycle 5
bna01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 9
sot01200 Carbon metabolism 3
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit00710 Carbon fixation by Calvin cycle 5
cit00010 Glycolysis / Gluconeogenesis 2
cit00030 Pentose phosphate pathway 2
cit00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 7
nta00710 Carbon fixation by Calvin cycle 5
nta00620 Pyruvate metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542374 110436993 8057802 4346332 123165753 123101856 123411341 100837587 835945 100305890 100782567 778287 543805 103856701 103851645 100247974 7479845 25484827 107904294 107943658 106388230 106435080 102582818 102622984 107778629 5722280
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