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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542392   ferritin homolog 2 
 zma-r.6   542392   ferritin homolog 2 
 zma-m.5   542392   ferritin homolog 2 
 zma-u.5   542553   ferritin 1 
 sbi-r.1   110435665   ferritin-1, chloroplastic-like 
 sbi-r.1   110437661   ferritin-1, chloroplastic 
 osa-u.5   9269178   ferritin-1, chloroplastic 
 osa-u.5   4351264   ferritin-1, chloroplastic 
 tae-r.2   100270664   ferritin-1, chloroplastic 
 tae-r.2   100270662   ferritin-1, chloroplastic 
 tae-r.2   100270663   ferritin-1, chloroplastic 
 hvu-r.1   123395254   ferritin-1, chloroplastic-like 
 hvu-r.1   123448137   ferritin-1, chloroplastic-like 
 bdi-r.1   100837024   ferritin-1, chloroplastic 
 ath-u.5   FER3   ferritin 3 
 ath-u.5   FER4   ferritin 4 
 ath-u.5   FER2   ferritin 2 
 gma-u.5   FER2-1   ferritin 
 gma-u.5   100778273   ferritin-2, chloroplastic 
 sly-u.5   104647958   ferritin-1, chloroplastic 
 sly-u.5   101260346   ferritin-2, chloroplastic 
 bra-r.6   103830031   ferritin-3, chloroplastic 
 bra-r.6   103841515   ferritin-3, chloroplastic 
 vvi-u.5   100267235   ferritin-3, chloroplastic 
 ppo-u.5   7474413   ferritin-3, chloroplastic 
 ppo-u.5   7462089   ferritin-3, chloroplastic 
 ppo-u.5   7460396   ferritin, chloroplastic 
 mtr-u.5   11412329   ferritin-1, chloroplastic 
 mtr-u.5   11421063   ferritin-2, chloroplastic 
 mtr-u.5   11428040   ferritin-3, chloroplastic 
 ghi-r.1   121207892   ferritin-3, chloroplastic 
 ghi-r.1   107937064   ferritin-3, chloroplastic 
 ghi-r.1   107931829   ferritin-3, chloroplastic 
 bna-r.1   106452550   ferritin-2, chloroplastic 
 bna-r.1   111200606   ferritin-3, chloroplastic-like 
 bna-r.1   106433816   ferritin-1, chloroplastic 
 sot-r.1   102577492   ferritin 
 sot-r.1   102577652   ferritin-3, chloroplastic 
 sot-r.1   102581985   ferritin-2, chloroplastic-like 
 cit-r.1   102615169   ferritin-3, chloroplastic 
 cit-r.1   102626899   ferritin-3, chloroplastic 
 nta-r.1   107832545   ferritin-2, chloroplastic 
 nta-r.1   107809228   ferritin-2, chloroplastic-like 
 nta-r.1   107801146   ferritin-1, chloroplastic-like 
 cre-r.1   CHLRE_09g387800v5   uncharacterized protein 

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Top 50 coexpressed genes to 542392 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542392 (zma-u.5 coexpression data)

CoexMap"542392"


zmaLOC542392 | Entrez gene ID : 542392      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 2 3 2 1 3 2 2 2 1 3 3 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00860 [list] [network] Porphyrin metabolism (67 genes)
GO BP
GO:0006879 [list] [network] intracellular iron ion homeostasis  (19 genes)  IEA  
GO:0006826 [list] [network] iron ion transport  (28 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
GO:0008199 [list] [network] ferric iron binding  (4 genes)  IEA  
GO:0008198 [list] [network] ferrous iron binding  (9 genes)  IEA  
Protein NP_001295757.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for NP_001295757.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for NP_001295757.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542392
zma-r.6
for
542392
zma-m.5
for
542392
zma-u.5
for
542553
sbi-r.1
for
110435665
sbi-r.1
for
110437661
osa-u.5
for
9269178
osa-u.5
for
4351264
tae-r.2
for
100270664
tae-r.2
for
100270662
tae-r.2
for
100270663
hvu-r.1
for
123395254
hvu-r.1
for
123448137
bdi-r.1
for
100837024
ath-u.5
for
FER3
ath-u.5
for
FER4
ath-u.5
for
FER2
gma-u.5
for
FER2-1
gma-u.5
for
100778273
sly-u.5
for
104647958
sly-u.5
for
101260346
bra-r.6
for
103830031
bra-r.6
for
103841515
vvi-u.5
for
100267235
ppo-u.5
for
7474413
ppo-u.5
for
7462089
ppo-u.5
for
7460396
mtr-u.5
for
11412329
mtr-u.5
for
11421063
mtr-u.5
for
11428040
ghi-r.1
for
121207892
ghi-r.1
for
107937064
ghi-r.1
for
107931829
bna-r.1
for
106452550
bna-r.1
for
111200606
bna-r.1
for
106433816
sot-r.1
for
102577492
sot-r.1
for
102577652
sot-r.1
for
102581985
cit-r.1
for
102615169
cit-r.1
for
102626899
nta-r.1
for
107832545
nta-r.1
for
107809228
nta-r.1
for
107801146
cre-r.1
for
CHLRE_09g387800v5


Ortholog ID: 2022
Species zma zma sbi sbi osa osa tae tae tae hvu hvu bdi ath ath ath gma sly sly bra bra vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre
Symbol LOC542392 LOC542553 LOC110435665 LOC110437661 LOC9269178 LOC4351264 LOC100270664 LOC100270662 LOC100270663 LOC123395254 LOC123448137 LOC100837024 FER3 FER4 FER2 LOC100810000 LOC104647958 LOC101260346 LOC103830031 LOC103855410 LOC100267235 LOC7462089 LOC7460396 LOC7468070 LOC11412329 LOC11421063 LOC11428040 LOC121207892 LOC107937064 LOC107904058 LOC106452550 LOC106433816 LOC106352904 LOC102577492 LOC102577652 LOC102581985 LOC102615169 LOC102626899 LOC107832545 LOC107809228 LOC107801146 CHLRE_09g387800v5
Function* ferritin homolog 2 ferritin 1 ferritin-1, chloroplastic-like ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic-like ferritin-1, chloroplastic-like ferritin-1, chloroplastic ferritin 3 ferritin 4 ferritin 2 ferritin-3, chloroplastic-like ferritin-1, chloroplastic ferritin-2, chloroplastic ferritin-3, chloroplastic ferritin-1, chloroplastic ferritin-3, chloroplastic ferritin-3, chloroplastic ferritin, chloroplastic ferritin, chloroplastic ferritin-1, chloroplastic ferritin-2, chloroplastic ferritin-3, chloroplastic ferritin-3, chloroplastic ferritin-3, chloroplastic ferritin-3, chloroplastic-like ferritin-2, chloroplastic ferritin-1, chloroplastic ferritin-3, chloroplastic ferritin ferritin-3, chloroplastic ferritin-2, chloroplastic-like ferritin-3, chloroplastic ferritin-3, chloroplastic ferritin-2, chloroplastic ferritin-2, chloroplastic-like ferritin-1, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 5
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
sly04146 Peroxisome 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 5
vvi00010 Glycolysis / Gluconeogenesis 3
vvi00330 Arginine and proline metabolism 3
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo00860 Porphyrin metabolism 3
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo00860 Porphyrin metabolism 3
ppo02010 ABC transporters 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 4
ppo00480 Glutathione metabolism 3
ppo02010 ABC transporters 2
ppo00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 4
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 5
mtr04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00410 beta-Alanine metabolism 7
ghi00640 Propanoate metabolism 7
ghi00071 Fatty acid degradation 6
ghi01212 Fatty acid metabolism 6
ghi01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 4
sot03008 Ribosome biogenesis in eukaryotes 3
sot03013 Nucleocytoplasmic transport 3
sot03250 Viral life cycle - HIV-1 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00710 Carbon fixation by Calvin cycle 2
cit01230 Biosynthesis of amino acids 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
cit01200 Carbon metabolism 2
cit00053 Ascorbate and aldarate metabolism 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 6
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542392 542553 110435665 110437661 9269178 4351264 100270664 100270662 100270663 123395254 123448137 100837024 824775 818622 820276 100810000 104647958 101260346 103830031 103855410 100267235 7462089 7460396 7468070 11412329 11421063 11428040 121207892 107937064 107904058 106452550 106433816 106352904 102577492 102577652 102581985 102615169 102626899 107832545 107809228 107801146 5720015
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