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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542468   outer cell layer 1 
 zma-r.6   542468   outer cell layer 1 
 zma-m.5   542468   outer cell layer 1 
 zma-u.5   100383907   uncharacterized LOC100383907 
 zma-u.5   542008   outer cell layer 3 
 osa-u.5   4347635   homeobox-leucine zipper protein ROC6-like 
 osa-u.5   4336705   homeobox-leucine zipper protein ROC4-like 
 osa-u.5   4330297   homeobox-leucine zipper protein ROC5-like 
 ath-u.5   HDG1   homeodomain GLABROUS 1 
 ath-u.5   ANL2   Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 
 gma-u.5   100783614   homeobox-leucine zipper protein ANTHOCYANINLESS 2 
 gma-u.5   100818372   homeobox-leucine zipper protein ANTHOCYANINLESS 2 
 gma-u.5   100794400   homeobox-leucine zipper protein ANTHOCYANINLESS 2 
 sly-u.5   CD2   cutin deficient 2 
 vvi-u.5   100267477   homeobox-leucine zipper protein ANTHOCYANINLESS 2 
 vvi-u.5   100260889   homeobox-leucine zipper protein ANTHOCYANINLESS 2 
 ppo-u.5   7461746   homeobox-leucine zipper protein ANTHOCYANINLESS 2 
 ppo-u.5   7464891   homeobox-leucine zipper protein ANTHOCYANINLESS 2 
 mtr-u.5   25502315   homeobox-leucine zipper protein ANTHOCYANINLESS 2 
 mtr-u.5   11431643   homeobox-leucine zipper protein ANTHOCYANINLESS 2 
 mtr-u.5   11429203   homeobox-leucine zipper protein ANTHOCYANINLESS 2 

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Top 50 coexpressed genes to 542468 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542468 (zma-u.5 coexpression data)

CoexMap"542468"


zmaLOC542468 | Entrez gene ID : 542468      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 2 3 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO MF
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (224 genes)  IEA  
GO:0008289 [list] [network] lipid binding  (304 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2288 genes)  IEA  
Protein NP_001105493.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 2  (predict for NP_001105493.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001105493.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542468

.
zma-r.6
for
542468

.
zma-m.5
for
542468

.
zma-u.5
for
100383907

.
zma-u.5
for
542008

.
osa-u.5
for
4347635

.
osa-u.5
for
4336705

.
osa-u.5
for
4330297

.
ath-u.5
for
HDG1

.
ath-u.5
for
ANL2

.
gma-u.5
for
100783614

.
gma-u.5
for
100818372

.
gma-u.5
for
100794400

.
sly-u.5
for
CD2

.
vvi-u.5
for
100267477

.
vvi-u.5
for
100260889

.
ppo-u.5
for
7461746

.
ppo-u.5
for
7464891

.
mtr-u.5
for
25502315

.
mtr-u.5
for
11431643

.
mtr-u.5
for
11429203

.


Ortholog ID: 2160
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol ANL2 HDG1 LOC100794400 LOC100787537 CD2 LOC4330297 LOC4336705 LOC542468 LOC542008 LOC103830285 LOC103866919 LOC100260889 LOC100267477 LOC7461746 LOC11429203 LOC25502315 LOC123112774 LOC123122252 LOC123401250 LOC123400019 LOC107957262 LOC107911955 LOC106396754 LOC106365533 LOC8059030 LOC8079064 LOC102587855 LOC102604504 LOC102627611 LOC102624374 LOC100843103 LOC100841844 LOC107788239 LOC107810005
Function* Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein homeodomain GLABROUS 1 homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ANTHOCYANINLESS 2 cutin deficient 2 homeobox-leucine zipper protein ROC5-like homeobox-leucine zipper protein ROC4-like outer cell layer 1 outer cell layer 3 homeobox-leucine zipper protein HDG1 homeobox-leucine zipper protein HDG1 homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ROC6 homeobox-leucine zipper protein ROC6 homeobox-leucine zipper protein ROC5-like homeobox-leucine zipper protein ROC6-like homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein HDG1-like homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ROC6 homeobox-leucine zipper protein ROC5 homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ANTHOCYANINLESS 2-like homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ANTHOCYANINLESS 2-like homeobox-leucine zipper protein ROC6 homeobox-leucine zipper protein ROC5 homeobox-leucine zipper protein ANTHOCYANINLESS 2 homeobox-leucine zipper protein ANTHOCYANINLESS 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly02010 ABC transporters 3
sly00062 Fatty acid elongation 2
sly04626 Plant-pathogen interaction 2
sly04081 Hormone signaling 2
sly04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00062 Fatty acid elongation 3
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00062 Fatty acid elongation 6
sbi04626 Plant-pathogen interaction 6
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 2
bdi04626 Plant-pathogen interaction 2
bdi00750 Vitamin B6 metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 4
bdi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828022 825287 100794400 100787537 100316889 4330297 4336705 542468 542008 103830285 103866919 100260889 100267477 7461746 11429203 25502315 123112774 123122252 123401250 123400019 107957262 107911955 106396754 106365533 8059030 8079064 102587855 102604504 102627611 102624374 100843103 100841844 107788239 107810005
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