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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542606   lesion22 
 zma-r.6   542606   lesion22 
 zma-m.5   542606   lesion22 
 osa-u.5   4332771   uroporphyrinogen decarboxylase 2, chloroplastic-like 
 ath-u.5   HEME2   Uroporphyrinogen decarboxylase 
 gma-u.5   100817154   uroporphyrinogen decarboxylase 
 gma-u.5   100800753   uroporphyrinogen decarboxylase, chloroplastic-like 
 sly-u.5   101250511   uroporphyrinogen decarboxylase, chloroplastic 
 vvi-u.5   100257034   uroporphyrinogen decarboxylase 
 ppo-u.5   7453573   uroporphyrinogen decarboxylase 
 mtr-u.5   11419047   uroporphyrinogen decarboxylase 

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Top 50 coexpressed genes to 542606 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542606 (zma-u.5 coexpression data)

CoexMap"542606"


zmaLOC542606 | Entrez gene ID : 542606      
Species zma osa ath gma sly vvi ppo mtr nta bna tae bdi sot bra sbi hvu cit cre ghi
Paralog 3 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00860 [list] [network] Porphyrin metabolism (67 genes)
zma01240 [list] [network] Biosynthesis of cofactors (295 genes)
GO BP
GO:0006779 [list] [network] porphyrin-containing compound biosynthetic process  (37 genes)  IEA  
GO CC
GO MF
GO:0004853 [list] [network] uroporphyrinogen decarboxylase activity  (9 genes)  IEA  
Protein NP_001105610.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for NP_001105610.2)
Subcellular
localization
TargetP
chlo 8,  mito 4  (predict for NP_001105610.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542606

.
zma-r.6
for
542606

.
zma-m.5
for
542606

.
osa-u.5
for
4332771

.
ath-u.5
for
HEME2

.
gma-u.5
for
100817154

.
gma-u.5
for
100800753

.
sly-u.5
for
101250511

.
vvi-u.5
for
100257034

.
ppo-u.5
for
7453573

.
mtr-u.5
for
11419047

.


Ortholog ID: 8913
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol HEME2 LOC100817154 LOC100800753 LOC101250511 LOC4332771 LOC542606 LOC103865812 LOC100257034 LOC7453573 LOC11419047 LOC123097534 LOC123092198 LOC123448678 LOC107904438 LOC107904738 LOC106391606 LOC106447524 CHLRE_11g467700v5 LOC8082327 LOC102582223 LOC102624636 LOC100822473 LOC107813684 LOC107807289
Function* Uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase, chloroplastic-like uroporphyrinogen decarboxylase, chloroplastic uroporphyrinogen decarboxylase 2, chloroplastic-like lesion22 uroporphyrinogen decarboxylase 2, chloroplastic uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase 2, chloroplastic uroporphyrinogen decarboxylase 2, chloroplastic uncharacterized protein uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase, chloroplastic uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase, chloroplastic uroporphyrinogen decarboxylase, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 9
ath01240 Biosynthesis of cofactors 8
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 6
gma01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 11
gma01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 7
sly01240 Biosynthesis of cofactors 7
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 6
osa00860 Porphyrin metabolism 4
osa03010 Ribosome 4
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 7
bra01240 Biosynthesis of cofactors 6
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 8
vvi01240 Biosynthesis of cofactors 5
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00860 Porphyrin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 6
mtr01240 Biosynthesis of cofactors 6
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae03010 Ribosome 3
tae00860 Porphyrin metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03010 Ribosome 3
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 7
ghi01240 Biosynthesis of cofactors 7
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 7
ghi01240 Biosynthesis of cofactors 7
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 12
bna01240 Biosynthesis of cofactors 12
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 12
bna01240 Biosynthesis of cofactors 12
bna00970 Aminoacyl-tRNA biosynthesis 3
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 12
cre01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 7
sbi01240 Biosynthesis of cofactors 5
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot01240 Biosynthesis of cofactors 4
sot00860 Porphyrin metabolism 3
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
cit00195 Photosynthesis 3
cit00860 Porphyrin metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00860 Porphyrin metabolism 4
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00860 Porphyrin metabolism 4
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
nta01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818644 100817154 100800753 101250511 4332771 542606 103865812 100257034 7453573 11419047 123097534 123092198 123448678 107904438 107904738 106391606 106447524 5725041 8082327 102582223 102624636 100822473 107813684 107807289
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