Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542733   S-adenosyl methionine decarboxylase 2 
 zma-r.6   542733   S-adenosyl methionine decarboxylase 2 
 zma-m.5   542733   S-adenosyl methionine decarboxylase 2 
 zma-u.5   100282888   uncharacterized LOC100282888 
 zma-u.5   100283320   S-adenosylmethionine decarboxylase proenzyme 
 zma-u.5   100282559   S-adenosylmethionine decarboxylase proenzyme 
 osa-u.5   4329955   S-adenosylmethionine decarboxylase proenzyme-like 
 osa-u.5   4347103   S-adenosylmethionine decarboxylase proenzyme 
 osa-u.5   4336294   S-adenosylmethionine decarboxylase proenzyme-like 
 ath-u.5   AT3G17717   S-adenosylmethionine decarboxylase proenzyme 
 ath-u.5   SAMDC   S-adenosylmethionine decarboxylase 
 ath-u.5   AT3G25570   Adenosylmethionine decarboxylase family protein 
 gma-u.5   121172625   S-adenosylmethionine decarboxylase proenzyme 
 gma-u.5   100800410   S-adenosylmethionine decarboxylase proenzyme 
 sly-u.5   101260400   S-adenosylmethionine decarboxylase 2 
 sly-u.5   101262142   S-adenosylmethionine decarboxylase proenzyme-like 
 sly-u.5   SAMDC   S-adenosylmethionine decarboxylase 
 vvi-u.5   SAMDC   S-adenosylmethionine decarboxylase proenzyme 
 vvi-u.5   100265287   S-adenosyl-L-methionine decarboxylase 
 ppo-u.5   7489418   S-adenosylmethionine decarboxylase proenzyme 
 ppo-u.5   7489389   S-adenosylmethionine decarboxylase proenzyme 
 mtr-u.5   25501498   S-adenosylmethionine decarboxylase proenzyme 
 mtr-u.5   25479432   S-adenosylmethionine decarboxylase proenzyme 
 mtr-u.5   25497643   S-adenosylmethionine decarboxylase proenzyme 

close


Top 50 coexpressed genes to 542733 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 542733 (zma-u.5 coexpression data)

CoexMap"542733"


zmaLOC542733 | Entrez gene ID : 542733      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 3 2 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00270 [list] [network] Cysteine and methionine metabolism (144 genes)
zma00330 [list] [network] Arginine and proline metabolism (61 genes)
GO BP
GO:0006597 [list] [network] spermine biosynthetic process  (5 genes)  IEA  
GO:0008295 [list] [network] spermidine biosynthetic process  (12 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (983 genes)  IEA  
GO MF
GO:0004014 [list] [network] adenosylmethionine decarboxylase activity  (5 genes)  IEA  
Protein NP_001105713.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001105713.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001105713.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542733

.
zma-r.6
for
542733

.
zma-m.5
for
542733

.
zma-u.5
for
100282888

.
zma-u.5
for
100283320

.
zma-u.5
for
100282559

.
osa-u.5
for
4329955

.
osa-u.5
for
4347103

.
osa-u.5
for
4336294

.
ath-u.5
for
AT3G17717

.
ath-u.5
for
SAMDC

.
ath-u.5
for
AT3G25570

.
gma-u.5
for
121172625

.
gma-u.5
for
100800410

.
sly-u.5
for
101260400

.
sly-u.5
for
101262142

.
sly-u.5
for
SAMDC

.
vvi-u.5
for
SAMDC

.
vvi-u.5
for
100265287

.
ppo-u.5
for
7489418

.
ppo-u.5
for
7489389

.
mtr-u.5
for
25501498

.
mtr-u.5
for
25479432

.
mtr-u.5
for
25497643

.


Ortholog ID: 1206
Species ath ath gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol AT3G25570 AT3G17717 LOC100790347 LOC101262142 LOC101260400 LOC4336294 LOC4347103 LOC100282888 LOC542733 LOC103858959 SAMDC LOC100265287 LOC7468377 LOC7489389 LOC25479432 LOC25497643 LOC123045917 LOC123144791 LOC123427133 LOC123397950 LOC107887408 LOC107887409 LOC106382860 LOC106352145 CHLRE_03g205900v5 LOC8059669 LOC102589057 LOC102595539 LOC102608436 SAMDC LOC100821031 LOC100845637 LOC107798785 LOC107794448
Function* Adenosylmethionine decarboxylase family protein S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme-like S-adenosylmethionine decarboxylase 2 S-adenosylmethionine decarboxylase proenzyme-like S-adenosylmethionine decarboxylase proenzyme uncharacterized LOC100282888 S-adenosyl methionine decarboxylase 2 S-adenosylmethionine decarboxylase proenzyme 3 S-adenosylmethionine decarboxylase proenzyme S-adenosyl-L-methionine decarboxylase S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme-like S-adenosylmethionine decarboxylase proenzyme-like S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme 3 S-adenosylmethionine decarboxylase proenzyme 3-like uncharacterized protein S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme-like S-adenosylmethionine decarboxylase proenzyme-like S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine decarboxylase proenzyme-like S-adenosylmethionine decarboxylase proenzyme-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 6
osa01230 Biosynthesis of amino acids 5
osa00920 Sulfur metabolism 2
osa01200 Carbon metabolism 2
osa00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
osa00230 Purine metabolism 3
osa01230 Biosynthesis of amino acids 3
osa00260 Glycine, serine and threonine metabolism 2
osa00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 6
zma00270 Cysteine and methionine metabolism 2
zma00330 Arginine and proline metabolism 2
zma00900 Terpenoid backbone biosynthesis 2
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04075 Plant hormone signal transduction 3
zma00270 Cysteine and methionine metabolism 2
zma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00053 Ascorbate and aldarate metabolism 2
vvi01240 Biosynthesis of cofactors 2
vvi00270 Cysteine and methionine metabolism 2
vvi00330 Arginine and proline metabolism 2
vvi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi00270 Cysteine and methionine metabolism 2
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00750 Vitamin B6 metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 6
ppo01240 Biosynthesis of cofactors 5
ppo01250 Biosynthesis of nucleotide sugars 5
ppo01230 Biosynthesis of amino acids 4
ppo00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 3
mtr00330 Arginine and proline metabolism 3
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 3
mtr00330 Arginine and proline metabolism 3
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00330 Arginine and proline metabolism 2
hvu00740 Riboflavin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
ghi00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
ghi00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 5
bna00330 Arginine and proline metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 5
bna00330 Arginine and proline metabolism 5
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00330 Arginine and proline metabolism 3
cre03013 Nucleocytoplasmic transport 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 3
sot00330 Arginine and proline metabolism 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 2
cit00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 2
cit00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 2
bdi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00330 Arginine and proline metabolism 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00330 Arginine and proline metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822144 28719279 100790347 101262142 101260400 4336294 4347103 100282888 542733 103858959 100240686 100265287 7468377 7489389 25479432 25497643 123045917 123144791 123427133 123397950 107887408 107887409 106382860 106352145 5718851 8059669 102589057 102595539 102608436 102578065 100821031 100845637 107798785 107794448
The preparation time of this page was 0.5 [sec].