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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   543185   protein H2A.7-like 
 tae-r.2   123052488   histone H2A.4-like 
 tae-r.2   123146235   probable histone H2AXb 
 tae-r.2   123139946   probable histone H2AXb 
 hvu-r.1   123425799   histone H2A.4 
 hvu-r.1   123451066   probable histone H2AXa 
 hvu-r.1   123425798   probable histone H2A.2 
 bdi-r.1   100846160   probable histone H2AXa 
 bdi-r.1   100830704   probable histone H2A.7 
 bdi-r.1   100830394   probable histone H2A.2 
 osa-u.5   9267462   probable histone H2A.3 
 osa-u.5   4333939   probable histone H2AXa 
 osa-u.5   4343518   probable histone H2A.1 
 zma-u.5   100194327   Histone H2A 
 zma-u.5   100273666   uncharacterized LOC100273666 
 zma-u.5   100274138   Histone H2A 
 sbi-r.1   8081716   probable histone H2A.2 
 sbi-r.1   8081715   probable histone H2A.1 
 sbi-r.1   8064629   probable histone H2AXb 
 ath-u.5   HTA13   histone H2A 13 
 ath-u.5   HTA2   histone H2A 2 
 ath-u.5   RAT5   Histone superfamily protein 
 gma-u.5   106798115   histone H2AX 
 gma-u.5   100793396   probable histone H2A.3 
 gma-u.5   100305465   uncharacterized LOC100305465 
 sly-u.5   101247665   probable histone H2A.1 
 sly-u.5   101262690   histone H2A.6 
 sly-u.5   101264975   histone H2AX-like 
 bra-r.6   103868592   probable histone H2A.1 
 bra-r.6   103869292   probable histone H2A.2 
 bra-r.6   103871626   probable histone H2AXa 
 vvi-u.5   100254490   histone H2AX 
 vvi-u.5   100257319   histone H2AX-like 
 vvi-u.5   100265822   probable histone H2A.2 
 ppo-u.5   112323895   histone H2AX 
 ppo-u.5   18109775   histone H2AX 
 ppo-u.5   18098846   histone H2AX 
 mtr-u.5   11434190   histone H2AX 
 mtr-u.5   11434641   histone H2AX 
 mtr-u.5   11408670   histone H2A.6 
 ghi-r.1   107933865   histone H2AX 
 ghi-r.1   107926310   probable histone H2A.1 
 ghi-r.1   107920392   probable histone H2A.1 
 bna-r.1   111213050   probable histone H2A.2 
 bna-r.1   106445749   probable histone H2A.3 
 bna-r.1   106451851   probable histone H2A.2 
 sot-r.1   102592368   probable histone H2AXb 
 sot-r.1   102603971   histone H2AX-like 
 sot-r.1   102597610   probable histone H2AXb 
 cit-r.1   102609655   histone H2A.6 
 cit-r.1   102618811   histone H2AX 
 cit-r.1   102619114   histone H2AX 
 nta-r.1   107770854   histone H2A.6 
 nta-r.1   107780380   histone H2A.6-like 
 cre-r.1   CHLRE_17g713400v5   uncharacterized protein 
 cre-r.1   CHLRE_06g264950v5   uncharacterized protein 
 cre-r.1   CHLRE_06g265350v5   uncharacterized protein 

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Top 50 coexpressed genes to 543185 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543185 (tae-r.2 coexpression data)

CoexMap"543185"


taeLOC543185 | Entrez gene ID : 543185    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03082 [list] [network] ATP-dependent chromatin remodeling (290 genes)
GO BP
GO CC
GO:0000786 [list] [network] nucleosome  (566 genes)  IEA  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (535 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (670 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6662 genes)  IEA  
Protein XP_044323343.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for XP_044323343.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_044323343.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
543185
tae-r.2
for
123052488
tae-r.2
for
123146235
tae-r.2
for
123139946
hvu-r.1
for
123425799
hvu-r.1
for
123451066
hvu-r.1
for
123425798
bdi-r.1
for
100846160
bdi-r.1
for
100830704
bdi-r.1
for
100830394
osa-u.5
for
9267462
osa-u.5
for
4333939
osa-u.5
for
4343518
zma-u.5
for
100194327
zma-u.5
for
100273666
zma-u.5
for
100274138
sbi-r.1
for
8081716
sbi-r.1
for
8081715
sbi-r.1
for
8064629
ath-u.5
for
HTA13
ath-u.5
for
HTA2
ath-u.5
for
RAT5
gma-u.5
for
106798115
gma-u.5
for
100793396
gma-u.5
for
100305465
sly-u.5
for
101247665
sly-u.5
for
101262690
sly-u.5
for
101264975
bra-r.6
for
103868592
bra-r.6
for
103869292
bra-r.6
for
103871626
vvi-u.5
for
100254490
vvi-u.5
for
100257319
vvi-u.5
for
100265822
ppo-u.5
for
112323895
ppo-u.5
for
18109775
ppo-u.5
for
18098846
mtr-u.5
for
11434190
mtr-u.5
for
11434641
mtr-u.5
for
11408670
ghi-r.1
for
107933865
ghi-r.1
for
107926310
ghi-r.1
for
107920392
bna-r.1
for
111213050
bna-r.1
for
106445749
bna-r.1
for
106451851
sot-r.1
for
102592368
sot-r.1
for
102603971
sot-r.1
for
102597610
cit-r.1
for
102609655
cit-r.1
for
102618811
cit-r.1
for
102619114
nta-r.1
for
107770854
nta-r.1
for
107780380
cre-r.1
for
CHLRE_17g713400v5
cre-r.1
for
CHLRE_06g264950v5
cre-r.1
for
CHLRE_06g265350v5


Ortholog ID: 242
Species tae tae tae hvu hvu hvu bdi bdi bdi osa osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly sly bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna sot sot sot cit cit cit nta nta nta cre cre cre
Symbol LOC123115855 LOC123044613 LOC123161694 LOC123425799 LOC123425798 LOC123401046 LOC100846160 LOC100830704 LOC100830394 LOC9267462 LOC4333939 LOC4352128 LOC100194327 LOC100273666 LOC100193816 LOC8081716 LOC8081715 LOC8059983 HTA13 H2AXA HTA10 LOC106798115 LOC100793396 LOC100818215 LOC101262690 LOC101264975 LOC101256806 LOC103844917 LOC103832842 LOC100254490 LOC100257319 LOC100259607 LOC112323895 LOC18109775 LOC18095880 LOC11408670 LOC11430690 LOC11443483 LOC107920392 LOC107903497 LOC107899136 LOC106345992 LOC125603080 LOC102592368 LOC102582157 LOC102586233 LOC102618811 LOC102619114 LOC102620423 LOC107780380 LOC107822337 LOC107800855 CHLRE_17g714100v5 CHLRE_06g268050v5 CHLRE_12g506250v5
Function* probable histone H2AXb histone H2A.4-like probable histone H2AXb histone H2A.4 probable histone H2A.2 probable histone H2AXb probable histone H2AXa probable histone H2A.7 probable histone H2A.2 probable histone H2A.3 probable histone H2AXa probable histone H2A.7 Histone H2A uncharacterized LOC100273666 uncharacterized LOC100193816 probable histone H2A.2 probable histone H2A.1 probable histone H2AXa histone H2A 13 Histone superfamily protein histone H2A 10 histone H2AX probable histone H2A.3 histone H2AX histone H2A.6 histone H2AX-like probable histone H2AXb histone H2A.6 probable histone H2A.1 histone H2AX histone H2AX-like histone H2AX histone H2AX histone H2AX histone H2A.6 histone H2A.6 histone H2AX probable histone H2AXb probable histone H2A.1 histone H2A.6 probable histone H2AXb probable histone H2A.2 probable histone H2A.2 probable histone H2AXb probable histone H2A.1 histone H2A.6-like histone H2AX histone H2AX histone H2AX histone H2A.6-like histone H2A.6 histone H2AX-like uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 5
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
bra00010 Glycolysis / Gluconeogenesis 2
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00240 Pyrimidine metabolism 3
vvi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi01232 Nucleotide metabolism 3
vvi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 6
sot00240 Pyrimidine metabolism 3
sot01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03060 Protein export 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123115855 123044613 123161694 123425799 123425798 123401046 100846160 100830704 100830394 9267462 4333939 4352128 100194327 100273666 100193816 8081716 8081715 8059983 821614 837409 841528 106798115 100793396 100818215 101262690 101264975 101256806 103844917 103832842 100254490 100257319 100259607 112323895 18109775 18095880 11408670 11430690 11443483 107920392 107903497 107899136 106345992 125603080 102592368 102582157 102586233 102618811 102619114 102620423 107780380 107822337 107800855 5725954 66053636 5716480
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