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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   543398   ammonium transporter 1 member 1 
 osa-u.5   4330008   ammonium transporter 1 member 2-like 
 osa-u.5   4330007   ammonium transporter 1 member 3 
 osa-u.5   4336365   ammonium transporter 1 member 1-like 
 zma-u.5   100273369   ammonium transporter3 
 zma-u.5   100272903   ammonium transporter1 
 zma-u.5   100191554   ammonium transporter2 
 ath-u.5   AMT1;2   ammonium transporter 1;2 
 ath-u.5   AMT1;3   ammonium transporter 1;3 
 gma-u.5   AMT1.3   ammonium transporter AMT1.3 
 gma-u.5   AMT1.4   ammonium transporter AMT1.4 
 gma-u.5   AMT1.5   ammonium transporter AMT1.5 
 sly-u.5   AMT1-2   ammonium transporter 
 sly-u.5   AMT1-1   ammonium transporter 1 member 1 
 vvi-u.5   100258016   ammonium transporter 1 member 1 
 ppo-u.5   7494760   ammonium transporter 1 member 1 
 ppo-u.5   7453549   ammonium transporter 1 member 2 
 mtr-u.5   11425490   ammonium transporter 1 member 1 
 mtr-u.5   11431735   ammonium transporter 1 member 2 

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Top 50 coexpressed genes to 543398 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543398 (tae-r.2 coexpression data)

CoexMap"543398"


taeLOC543398 | Entrez gene ID : 543398    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 3 3 2 3 2 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0097272 [list] [network] ammonium homeostasis  (6 genes)  IEA  
GO:0072488 [list] [network] ammonium transmembrane transport  (23 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2781 genes)  IEA  
GO MF
GO:0008519 [list] [network] ammonium channel activity  (23 genes)  IEA  
Protein XP_044458175.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  cyto 2,  plas 2,  cyto_plas 2,  E.R._vacu 1,  mito_plas 1  (predict for XP_044458175.1)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for XP_044458175.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
543398

.
osa-u.5
for
4330008

.
osa-u.5
for
4330007

.
osa-u.5
for
4336365

.
zma-u.5
for
100273369

.
zma-u.5
for
100272903

.
zma-u.5
for
100191554

.
ath-u.5
for
AMT1;2

.
ath-u.5
for
AMT1;3

.
gma-u.5
for
AMT1.3

.
gma-u.5
for
AMT1.4

.
gma-u.5
for
AMT1.5

.
sly-u.5
for
AMT1-2

.
sly-u.5
for
AMT1-1

.
vvi-u.5
for
100258016

.
ppo-u.5
for
7494760

.
ppo-u.5
for
7453549

.
mtr-u.5
for
11425490

.
mtr-u.5
for
11431735

.


Ortholog ID: 1427
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AMT1;3 AMT1.3 AMT1.4 AMT1-2 AMT1-1 LOC4330007 LOC4330008 LOC100272903 LOC100191554 LOC103831827 LOC103860026 LOC100258016 LOC7494760 LOC7453549 LOC11431735 LOC123053879 LOC123144848 LOC123427217 LOC123402387 LOC107892566 LOC107924585 LOC106356753 LOC106389781 CHLRE_13g569850v5 CHLRE_07g355650v5 LOC8072485 LOC8075921 LOC102578704 LOC102578709 LOC102628413 LOC100840330 LOC100835289 LOC107802452 LOC107824732
Function* ammonium transporter 1;3 ammonium transporter AMT1.3 ammonium transporter AMT1.4 ammonium transporter ammonium transporter 1 member 1 ammonium transporter 1 member 3 ammonium transporter 1 member 2-like ammonium transporter1 ammonium transporter2 ammonium transporter 1 member 3-like putative ammonium transporter 1 member 5 ammonium transporter 1 member 1 ammonium transporter 1 member 1 ammonium transporter 1 member 2 ammonium transporter 1 member 2 ammonium transporter 1 member 1 ammonium transporter 1 member 2-like ammonium transporter 1 member 1 ammonium transporter 1 member 2 ammonium transporter 1 member 2 ammonium transporter 1 member 4 ammonium transporter 1 member 3-like ammonium transporter 1 member 4-like uncharacterized protein uncharacterized protein ammonium transporter 1 member 2 ammonium transporter 1 member 1 ammonium transporter 1 member 2 ammonium transporter 1 member 1 ammonium transporter 1 member 1 ammonium transporter 1 member 2 ammonium transporter 1 member 1 ammonium transporter 1 member 2 ammonium transporter 1 member 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00910 Nitrogen metabolism 2
gma01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00908 Zeatin biosynthesis 5
gma04075 Plant hormone signal transduction 3
gma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 7
sly01320 Sulfur cycle 6
sly01230 Biosynthesis of amino acids 4
sly01240 Biosynthesis of cofactors 3
sly00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 7
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma00910 Nitrogen metabolism 3
zma00220 Arginine biosynthesis 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00062 Fatty acid elongation 3
bra01212 Fatty acid metabolism 3
bra01040 Biosynthesis of unsaturated fatty acids 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00940 Phenylpropanoid biosynthesis 3
ppo00941 Flavonoid biosynthesis 2
ppo00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 4
mtr01200 Carbon metabolism 4
mtr00010 Glycolysis / Gluconeogenesis 3
mtr00030 Pentose phosphate pathway 3
mtr00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00750 Vitamin B6 metabolism 5
tae01240 Biosynthesis of cofactors 5
tae00030 Pentose phosphate pathway 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00380 Tryptophan metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
sot01310 Nitrogen cycle 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 2
sot00780 Biotin metabolism 2
sot01212 Fatty acid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00750 Vitamin B6 metabolism 2
bdi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00750 Vitamin B6 metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 5
nta00941 Flavonoid biosynthesis 4
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822018 100797209 100797759 544110 101265282 4330007 4330008 100272903 100191554 103831827 103860026 100258016 7494760 7453549 11431735 123053879 123144848 123427217 123402387 107892566 107924585 106356753 106389781 5719116 5727611 8072485 8075921 102578704 102578709 102628413 100840330 100835289 107802452 107824732
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