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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   543457   protein ROOT HAIR DEFECTIVE 3 
 tae-r.2   123127755   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 tae-r.2   123069972   protein ROOT HAIR DEFECTIVE 3 
 hvu-r.1   123403912   protein ROOT HAIR DEFECTIVE 3 homolog 2-like 
 hvu-r.1   123395783   protein ROOT HAIR DEFECTIVE 3 homolog 1-like 
 hvu-r.1   123443749   protein ROOT HAIR DEFECTIVE 3 
 bdi-r.1   100832066   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 bdi-r.1   100844574   protein ROOT HAIR DEFECTIVE 3 
 osa-u.5   4326314   protein ROOT HAIR DEFECTIVE 3-like 
 osa-u.5   4350788   protein ROOT HAIR DEFECTIVE 3 homolog 2-like 
 zma-u.5   103645055   protein ROOT HAIR DEFECTIVE 3 homolog 1 
 zma-u.5   103654528   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 zma-u.5   103650479   protein ROOT HAIR DEFECTIVE 3 homolog 1 
 sbi-r.1   8062662   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 sbi-r.1   8078209   protein ROOT HAIR DEFECTIVE 3 
 sbi-r.1   8084550   protein ROOT HAIR DEFECTIVE 3 
 ath-u.5   RHD3   Root hair defective 3 GTP-binding protein (RHD3) 
 ath-u.5   RL2   Root hair defective 3 GTP-binding protein (RHD3) 
 gma-u.5   100777656   protein ROOT HAIR DEFECTIVE 3 homolog 1 
 gma-u.5   100780006   protein ROOT HAIR DEFECTIVE 3 homolog 1 
 gma-u.5   100791046   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 sly-u.5   101266805   protein ROOT HAIR DEFECTIVE 3 
 sly-u.5   101253164   protein ROOT HAIR DEFECTIVE 3-like 
 sly-u.5   101245707   protein ROOT HAIR DEFECTIVE 3 homolog 2-like 
 bra-r.6   103859545   protein ROOT HAIR DEFECTIVE 3 
 bra-r.6   103827813   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 vvi-u.5   100241105   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 vvi-u.5   100254873   protein ROOT HAIR DEFECTIVE 3 
 ppo-u.5   18096753   protein ROOT HAIR DEFECTIVE 3 
 ppo-u.5   18094860   protein ROOT HAIR DEFECTIVE 3 
 ppo-u.5   7456688   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 mtr-u.5   25486287   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 mtr-u.5   25500448   protein ROOT HAIR DEFECTIVE 3 
 ghi-r.1   107895747   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 ghi-r.1   107891723   protein ROOT HAIR DEFECTIVE 3 
 ghi-r.1   107889095   protein ROOT HAIR DEFECTIVE 3 
 bna-r.1   125608693   protein ROOT HAIR DEFECTIVE 3 
 bna-r.1   106432181   protein ROOT HAIR DEFECTIVE 3 
 sot-r.1   102580214   protein ROOT HAIR DEFECTIVE 3 homolog 2-like 
 sot-r.1   102588648   protein ROOT HAIR DEFECTIVE 3 
 sot-r.1   102596203   protein ROOT HAIR DEFECTIVE 3-like 
 cit-r.1   102625846   protein ROOT HAIR DEFECTIVE 3-like 
 cit-r.1   102622723   protein ROOT HAIR DEFECTIVE 3 homolog 2 
 nta-r.1   107771827   protein ROOT HAIR DEFECTIVE 3-like 
 nta-r.1   107791269   protein ROOT HAIR DEFECTIVE 3-like 
 nta-r.1   107810746   protein ROOT HAIR DEFECTIVE 3-like 
 cre-r.1   CHLRE_10g439600v5   uncharacterized protein 

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Top 50 coexpressed genes to 543457 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543457 (tae-r.2 coexpression data)

CoexMap"543457"


taeLOC543457 | Entrez gene ID : 543457    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 2 2 3 3 2 3 3 2 2 3 2 3 2 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016320 [list] [network] endoplasmic reticulum membrane fusion  (12 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (1516 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (553 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (638 genes)  IEA  
Protein XP_044340312.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  E.R._plas 3,  vacu 2,  cyto 1,  chlo 1,  extr 1,  cyto_nucl 1,  cyto_pero 1  (predict for XP_044340312.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044340312.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
543457
tae-r.2
for
123127755
tae-r.2
for
123069972
hvu-r.1
for
123403912
hvu-r.1
for
123395783
hvu-r.1
for
123443749
bdi-r.1
for
100832066
bdi-r.1
for
100844574
osa-u.5
for
4326314
osa-u.5
for
4350788
zma-u.5
for
103645055
zma-u.5
for
103654528
zma-u.5
for
103650479
sbi-r.1
for
8062662
sbi-r.1
for
8078209
sbi-r.1
for
8084550
ath-u.5
for
RHD3
ath-u.5
for
RL2
gma-u.5
for
100777656
gma-u.5
for
100780006
gma-u.5
for
100791046
sly-u.5
for
101266805
sly-u.5
for
101253164
sly-u.5
for
101245707
bra-r.6
for
103859545
bra-r.6
for
103827813
vvi-u.5
for
100241105
vvi-u.5
for
100254873
ppo-u.5
for
18096753
ppo-u.5
for
18094860
ppo-u.5
for
7456688
mtr-u.5
for
25486287
mtr-u.5
for
25500448
ghi-r.1
for
107895747
ghi-r.1
for
107891723
ghi-r.1
for
107889095
bna-r.1
for
125608693
bna-r.1
for
106432181
sot-r.1
for
102580214
sot-r.1
for
102588648
sot-r.1
for
102596203
cit-r.1
for
102625846
cit-r.1
for
102622723
nta-r.1
for
107771827
nta-r.1
for
107791269
nta-r.1
for
107810746
cre-r.1
for
CHLRE_10g439600v5


Ortholog ID: 1461
Species tae tae hvu hvu hvu bdi bdi osa osa zma zma zma sbi sbi sbi ath ath gma gma sly sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna sot sot sot cit cit nta nta nta cre
Symbol LOC123069972 LOC123078436 LOC123403912 LOC123395783 LOC123443749 LOC100832066 LOC100844574 LOC4326314 LOC4350788 LOC103645055 LOC103654528 LOC103637341 LOC8078209 LOC8084550 LOC8076660 RHD3 RL2 LOC100791046 LOC100800151 LOC101266805 LOC101253164 LOC101245707 LOC103859545 LOC103827813 LOC103859541 LOC100241105 LOC100254873 LOC18096753 LOC18094860 LOC7456688 LOC25486287 LOC25500448 LOC107891723 LOC121229367 LOC107906096 LOC106391325 LOC102580214 LOC102588648 LOC102596203 LOC102625846 LOC102622723 LOC107791269 LOC107816706 LOC107831965 CHLRE_10g439600v5
Function* protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 homolog 2-like protein ROOT HAIR DEFECTIVE 3 homolog 1-like protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3-like protein ROOT HAIR DEFECTIVE 3 homolog 2-like protein ROOT HAIR DEFECTIVE 3 homolog 1 protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 homolog 1 Root hair defective 3 GTP-binding protein (RHD3) Root hair defective 3 GTP-binding protein (RHD3) protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3-like protein ROOT HAIR DEFECTIVE 3 homolog 2-like protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 homolog 2-like protein ROOT HAIR DEFECTIVE 3 protein ROOT HAIR DEFECTIVE 3-like protein ROOT HAIR DEFECTIVE 3-like protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3-like protein ROOT HAIR DEFECTIVE 3 homolog 2 protein ROOT HAIR DEFECTIVE 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00061 Fatty acid biosynthesis 3
tae00071 Fatty acid degradation 3
tae01212 Fatty acid metabolism 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae04144 Endocytosis 3
tae00562 Inositol phosphate metabolism 2
tae04070 Phosphatidylinositol signaling system 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 3
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi00190 Oxidative phosphorylation 2
bdi04142 Lysosome 2
bdi04145 Phagosome 2
bdi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
zma04141 Protein processing in endoplasmic reticulum 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi05100 Bacterial invasion of epithelial cells 3
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04142 Lysosome 2
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma03018 RNA degradation 2
gma04142 Lysosome 2
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 6
gma05100 Bacterial invasion of epithelial cells 6
gma04142 Lysosome 4
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 4
sly04144 Endocytosis 4
sly05100 Bacterial invasion of epithelial cells 4
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 4
sly01230 Biosynthesis of amino acids 3
sly02010 ABC transporters 2
sly00260 Glycine, serine and threonine metabolism 2
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 8
ppo00020 Citrate cycle (TCA cycle) 7
ppo01210 2-Oxocarboxylic acid metabolism 7
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo04120 Ubiquitin mediated proteolysis 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00020 Citrate cycle (TCA cycle) 4
mtr01200 Carbon metabolism 4
mtr01210 2-Oxocarboxylic acid metabolism 4
mtr00190 Oxidative phosphorylation 4
mtr04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 4
ghi00620 Pyruvate metabolism 3
ghi01230 Biosynthesis of amino acids 3
ghi00710 Carbon fixation by Calvin cycle 2
ghi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi01232 Nucleotide metabolism 4
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 4
cit04141 Protein processing in endoplasmic reticulum 3
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta04148 Efferocytosis 2
nta04142 Lysosome 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta04144 Endocytosis 2
nta05100 Bacterial invasion of epithelial cells 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123069972 123078436 123403912 123395783 123443749 100832066 100844574 4326314 4350788 103645055 103654528 103637341 8078209 8084550 8076660 820600 834552 100791046 100800151 101266805 101253164 101245707 103859545 103827813 103859541 100241105 100254873 18096753 18094860 7456688 25486287 25500448 107891723 121229367 107906096 106391325 102580214 102588648 102596203 102625846 102622723 107791269 107816706 107831965 5715941
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