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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   HMGR   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 
 sly-r.6   HMGR   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 
 sly-u.5   HMG2   3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 
 sly-u.5   HMG3   3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 
 sly-u.5   HMGR4   3-hydroxy-3-methylglutaryl-coenzyme A reductase 4 
 ath-u.5   HMG2   3-hydroxy-3-methylglutaryl-CoA reductase 2 
 ath-u.5   HMG1   hydroxy methylglutaryl CoA reductase 1 
 gma-u.5   100777317   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 
 gma-u.5   100784330   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 
 gma-u.5   100786956   3-hydroxy-3-methylglutaryl coenzyme A reductase 1 
 vvi-u.5   100265082   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 
 vvi-u.5   100245191   3-hydroxy-3-methylglutaryl-coenzyme A reductase 
 vvi-u.5   100243051   3-hydroxy-3-methylglutaryl coenzyme A reductase 2-A 
 ppo-u.5   7480368   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 
 ppo-u.5   7463352   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 
 mtr-u.5   120580466   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like 
 mtr-u.5   120580464   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like 
 mtr-u.5   11407896   3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 
 osa-u.5   4346017   3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-like 
 osa-u.5   4347443   3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-like 
 zma-u.5   100191922   3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 

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Top 50 coexpressed genes to HMGR (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HMGR (sly-u.5 coexpression data)

CoexMap"543702"


slyHMGR | Entrez gene ID : 543702      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 3 3 2 3 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00900 [list] [network] Terpenoid backbone biosynthesis (57 genes)
GO BP
GO:0015936 [list] [network] coenzyme A metabolic process  (16 genes)  IEA  
GO:0016126 [list] [network] sterol biosynthetic process  (27 genes)  IEA  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (124 genes)  IEA  
GO CC
GO:0005778 [list] [network] peroxisomal membrane  (28 genes)  IEA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (235 genes)  IEA  
GO MF
GO:0004420 [list] [network] hydroxymethylglutaryl-CoA reductase (NADPH) activity  (5 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein NP_001296810.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  plas 2,  cyto_E.R. 2,  chlo 1,  nucl_plas 1,  E.R._vacu 1  (predict for NP_001296810.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001296810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
HMGR

.
sly-r.6
for
HMGR

.
sly-u.5
for
HMG2

.
sly-u.5
for
HMG3

.
sly-u.5
for
HMGR4

.
ath-u.5
for
HMG2

.
ath-u.5
for
HMG1

.
gma-u.5
for
100777317

.
gma-u.5
for
100784330

.
gma-u.5
for
100786956

.
vvi-u.5
for
100265082

.
vvi-u.5
for
100245191

.
vvi-u.5
for
100243051

.
ppo-u.5
for
7480368

.
ppo-u.5
for
7463352

.
mtr-u.5
for
120580466

.
mtr-u.5
for
120580464

.
mtr-u.5
for
11407896

.
osa-u.5
for
4346017

.
osa-u.5
for
4347443

.
zma-u.5
for
100191922

.


Ortholog ID: 1254
Species ath ath gma gma sly sly osa osa zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol HMG2 HMG1 LOC100786956 LOC100790033 HMG3 HMGR4 LOC4347443 LOC4346017 LOC100191922 LOC103832111 LOC103845964 LOC100243051 LOC100265082 LOC7480368 LOC11416581 LOC11407896 LOC123112452 LOC123121961 LOC123399477 LOC123408561 LOC107898896 LOC107900974 LOC106393352 LOC106447170 LOC8057903 LOC8054742 LOC102577467 LOC102599791 LOC102609952 LOC102629783 LOC100828238 LOC100840327 LOC142179436 LOC107759218
Function* 3-hydroxy-3-methylglutaryl-CoA reductase 2 hydroxy methylglutaryl CoA reductase 1 3-hydroxy-3-methylglutaryl coenzyme A reductase 1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 3-hydroxy-3-methylglutaryl-coenzyme A reductase 4 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 3-hydroxy-3-methylglutaryl coenzyme A reductase 2-A 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 HMG-CoA reductase 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 12
gma00280 Valine, leucine and isoleucine degradation 3
gma00650 Butanoate metabolism 3
gma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 6
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma00999 Biosynthesis of various plant secondary metabolites 2
gma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 3
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 9
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
hvu00290 Valine, leucine and isoleucine biosynthesis 2
hvu00770 Pantothenate and CoA biosynthesis 2
hvu01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04382 Cornified envelope formation 4
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04382 Cornified envelope formation 4
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 6
sbi01230 Biosynthesis of amino acids 4
sbi00010 Glycolysis / Gluconeogenesis 3
sbi00051 Fructose and mannose metabolism 3
sbi00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 10
sot00280 Valine, leucine and isoleucine degradation 3
sot00650 Butanoate metabolism 3
sot00020 Citrate cycle (TCA cycle) 3
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 12
sot00280 Valine, leucine and isoleucine degradation 4
sot00650 Butanoate metabolism 4
sot01200 Carbon metabolism 4
sot00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 9
nta00020 Citrate cycle (TCA cycle) 6
nta00071 Fatty acid degradation 3
nta00280 Valine, leucine and isoleucine degradation 3
nta00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01250 Biosynthesis of nucleotide sugars 5
nta00520 Amino sugar and nucleotide sugar metabolism 3
nta00541 Biosynthesis of various nucleotide sugars 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816244 843982 100786956 100790033 101266490 101266800 4347443 4346017 100191922 103832111 103845964 100243051 100265082 7480368 11416581 11407896 123112452 123121961 123399477 123408561 107898896 107900974 106393352 106447170 8057903 8054742 102577467 102599791 102609952 102629783 100828238 100840327 142179436 107759218
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