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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   bmy3   1,4-alpha-glucan-maltohydrolase 
 sly-r.6   bmy3   1,4-alpha-glucan-maltohydrolase 
 sly-m.5   bmy3   1,4-alpha-glucan-maltohydrolase 
 ath-u.5   BMY3   beta-amylase 3 
 gma-u.5   547684   beta-amylase 
 gma-u.5   100778885   inactive beta-amylase 9 
 vvi-u.5   100263193   inactive beta-amylase 9 
 ppo-u.5   7454257   inactive beta-amylase 9 
 mtr-u.5   11439328   inactive beta-amylase 9 
 osa-u.5   4344219   inactive beta-amylase 9 
 zma-u.5   100383913   uncharacterized LOC100383913 

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Top 50 coexpressed genes to bmy3 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to bmy3 (sly-u.5 coexpression data)

CoexMap"543804"


slybmy3 | Entrez gene ID : 543804      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (57 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (8 genes)  IEA  
Protein NP_001234052.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  vacu 1,  cysk 1  (predict for NP_001234052.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001234052.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
bmy3

.
sly-r.6
for
bmy3

.
sly-m.5
for
bmy3

.
ath-u.5
for
BMY3

.
gma-u.5
for
547684

.
gma-u.5
for
100778885

.
vvi-u.5
for
100263193

.
ppo-u.5
for
7454257

.
mtr-u.5
for
11439328

.
osa-u.5
for
4344219

.
zma-u.5
for
100383913

.


Ortholog ID: 7727
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae ghi ghi bna bna cre sot cit nta nta
Symbol BMY3 LOC547684 LOC100778885 bmy3 LOC4344219 LOC100383913 LOC103845813 LOC103856327 LOC100263193 LOC7454257 LOC11439328 LOC123187590 LOC123051667 LOC107949161 LOC107913643 LOC106371917 LOC106387808 CHLRE_06g270350v5 LOC102590483 LOC102577946 LOC107780374 LOC107827956
Function* beta-amylase 3 beta-amylase inactive beta-amylase 9 1,4-alpha-glucan-maltohydrolase inactive beta-amylase 9 uncharacterized LOC100383913 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9-like uncharacterized protein inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9 inactive beta-amylase 9-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00592 alpha-Linolenic acid metabolism 3
gma00500 Starch and sucrose metabolism 2
gma00640 Propanoate metabolism 2
gma00100 Steroid biosynthesis 2
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 4
osa00360 Phenylalanine metabolism 2
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 4
vvi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 4
cre00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831985 547684 100778885 543804 4344219 100383913 103845813 103856327 100263193 7454257 11439328 123187590 123051667 107949161 107913643 106371917 106387808 5721854 102590483 102577946 107780374 107827956
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