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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   CDKC   cyclin dependent kinase C 
 sly-r.6   CDKC   cyclin dependent kinase C 
 sly-m.5   CDKC   cyclin dependent kinase C 
 sly-u.5   101268768   cyclin-dependent kinase C-2 
 sot-r.1   102591407   cyclin-dependent kinase C-2-like 
 sot-r.1   102582666   cyclin-dependent kinase C-1-like 
 nta-r.1   107804852   cyclin-dependent kinase C-1 
 nta-r.1   107776465   cyclin-dependent kinase C-1-like 
 nta-r.1   107760785   cyclin-dependent kinase C-2 
 ath-u.5   CDKC;1   cyclin-dependent kinase C;1 
 ath-u.5   CDKC2   cyclin dependent kinase group C2 
 gma-u.5   100793565   cyclin-dependent kinase C-2 
 gma-u.5   100780860   cyclin-dependent kinase C-2 
 gma-u.5   100795971   cyclin-dependent kinase C-2 
 bra-r.6   103832231   cyclin-dependent kinase C-2 
 bra-r.6   103846824   cyclin-dependent kinase C-1 
 bra-r.6   103855268   cyclin-dependent kinase C-2 
 vvi-u.5   100854820   cyclin-dependent kinase C-1 
 vvi-u.5   100263383   cyclin-dependent kinase C-2 
 ppo-u.5   7493193   cyclin-dependent kinase C-2 
 ppo-u.5   7479619   cyclin-dependent kinase C-2 
 mtr-u.5   25488867   cyclin-dependent kinase C-2 
 mtr-u.5   25488855   cyclin-dependent kinase C-2 
 ghi-r.1   107900711   cyclin-dependent kinase C-2 
 ghi-r.1   107930109   cyclin-dependent kinase C-2 
 bna-r.1   125580707   cyclin-dependent kinase C-2-like 
 bna-r.1   111215932   cyclin-dependent kinase C-2 
 bna-r.1   106382886   cyclin-dependent kinase C-2 
 cit-r.1   102621414   cyclin-dependent kinase C-1 
 osa-u.5   4338674   cyclin-dependent kinase C-1-like 
 zma-u.5   103625921   cyclin-dependent kinase C-2 
 zma-u.5   100279243   putative cyclin-dependent protein kinase C family protein 
 tae-r.2   123181876   cyclin-dependent kinase C-2 
 tae-r.2   123131077   cyclin-dependent kinase C-2 
 tae-r.2   123072591   cyclin-dependent kinase C-2 
 hvu-r.1   123439690   cyclin-dependent kinase C-2 
 sbi-r.1   8076846   cyclin-dependent kinase C-2 
 bdi-r.1   100836145   cyclin-dependent kinase C-2 
 bdi-r.1   104584626   uncharacterized LOC104584626 
 cre-r.1   CHLRE_08g385850v5   uncharacterized protein 

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Top 50 coexpressed genes to CDKC (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CDKC (sly-u.5 coexpression data)

CoexMap"544242"


slyCDKC | Entrez gene ID : 544242      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 3 2 3 3 2 2 2 2 3 1 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032968 [list] [network] positive regulation of transcription elongation by RNA polymerase II  (19 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (1059 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (79 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0008353 [list] [network] RNA polymerase II CTD heptapeptide repeat kinase activity  (17 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
Protein NP_001234799.1 [sequence] [blastp]
XP_010319695.1 [sequence] [blastp]
XP_025886217.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_001234799.1)
nucl 6,  cyto 4  (predict for XP_010319695.1)
nucl 5,  cyto 4  (predict for XP_025886217.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001234799.1)
other 7  (predict for XP_010319695.1)
other 8  (predict for XP_025886217.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
CDKC
sly-r.6
for
CDKC
sly-m.5
for
CDKC
sly-u.5
for
101268768
sot-r.1
for
102591407
sot-r.1
for
102582666
nta-r.1
for
107804852
nta-r.1
for
107776465
nta-r.1
for
107760785
ath-u.5
for
CDKC;1
ath-u.5
for
CDKC2
gma-u.5
for
100793565
gma-u.5
for
100780860
gma-u.5
for
100795971
bra-r.6
for
103832231
bra-r.6
for
103846824
bra-r.6
for
103855268
vvi-u.5
for
100854820
vvi-u.5
for
100263383
ppo-u.5
for
7493193
ppo-u.5
for
7479619
mtr-u.5
for
25488867
mtr-u.5
for
25488855
ghi-r.1
for
107900711
ghi-r.1
for
107930109
bna-r.1
for
125580707
bna-r.1
for
111215932
bna-r.1
for
106382886
cit-r.1
for
102621414
osa-u.5
for
4338674
zma-u.5
for
103625921
zma-u.5
for
100279243
tae-r.2
for
123181876
tae-r.2
for
123131077
tae-r.2
for
123072591
hvu-r.1
for
123439690
sbi-r.1
for
8076846
bdi-r.1
for
100836145
bdi-r.1
for
104584626
cre-r.1
for
CHLRE_08g385850v5


Ortholog ID: 4123
Species sly sly sot sot nta nta nta ath ath gma gma gma bra bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna bna cit osa zma zma tae tae tae hvu sbi bdi bdi cre
Symbol CDKC LOC101268768 LOC102591407 LOC102582666 LOC107804852 LOC107776465 LOC107760785 CDKC;1 CDKC2 LOC100793565 LOC100780860 LOC100795971 LOC103832231 LOC103846824 LOC103855268 LOC100854820 LOC100263383 LOC7493193 LOC7479619 LOC25488867 LOC25488855 LOC107900711 LOC107930109 LOC111215932 LOC106382886 LOC106382849 LOC102621414 LOC4338674 LOC103625921 LOC100279243 LOC123181876 LOC123131077 LOC123072591 LOC123439690 LOC8076846 LOC100836145 LOC104584626 CHLRE_08g385850v5
Function* cyclin dependent kinase C cyclin-dependent kinase C-2 cyclin-dependent kinase C-2-like cyclin-dependent kinase C-1-like cyclin-dependent kinase C-1 cyclin-dependent kinase C-1-like cyclin-dependent kinase C-2 cyclin-dependent kinase C;1 cyclin dependent kinase group C2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-1 cyclin-dependent kinase C-2 cyclin-dependent kinase C-1 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-1 cyclin-dependent kinase C-1-like cyclin-dependent kinase C-2 putative cyclin-dependent protein kinase C family protein cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 cyclin-dependent kinase C-2 uncharacterized LOC104584626 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03010 Ribosome 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 4
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
vvi04141 Protein processing in endoplasmic reticulum 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr03040 Spliceosome 4
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 4
bna03040 Spliceosome 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 4
bna03040 Spliceosome 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03420 Nucleotide excision repair 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03440 Homologous recombination 2
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
zma03015 mRNA surveillance pathway 3
zma03040 Spliceosome 2
zma03420 Nucleotide excision repair 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae00543 Exopolysaccharide biosynthesis 3
tae00920 Sulfur metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 544242 101268768 102591407 102582666 107804852 107776465 107760785 830891 836620 100793565 100780860 100795971 103832231 103846824 103855268 100854820 100263383 7493193 7479619 25488867 25488855 107900711 107930109 111215932 106382886 106382849 102621414 4338674 103625921 100279243 123181876 123131077 123072591 123439690 8076846 100836145 104584626 5719783
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