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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   544276   isocitrate lyase 
 sly-r.6   544276   isocitrate lyase 
 sly-m.5   544276   isocitrate lyase 
 ath-u.5   ICL   isocitrate lyase 
 gma-u.5   ICL1   isocitrate lyase 1-like 
 gma-u.5   ICL   isocitrate lyase 2 
 vvi-u.5   100248231   isocitrate lyase 
 osa-u.5   4343441   isocitrate lyase-like 
 zma-u.5   103633249   isocitrate lyase 

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Top 50 coexpressed genes to 544276 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 544276 (sly-u.5 coexpression data)

CoexMap"544276"


slyLOC544276 | Entrez gene ID : 544276      
Species sly ath gma vvi osa zma ppo cre mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00630 [list] [network] Glyoxylate and dicarboxylate metabolism (81 genes)
sly00640 [list] [network] Propanoate metabolism (52 genes)
sly01200 [list] [network] Carbon metabolism (290 genes)
GO BP
GO:0019752 [list] [network] carboxylic acid metabolic process  (629 genes)  IEA  
GO CC
GO:0009514 [list] [network] glyoxysome  (1 genes)  IEA  
GO MF
GO:0004451 [list] [network] isocitrate lyase activity  (1 genes)  IEA  
Protein NP_001233878.2 [sequence] [blastp]
Subcellular
localization
wolf
pero 6,  chlo 1,  extr 1  (predict for NP_001233878.2)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for NP_001233878.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
544276

.
sly-r.6
for
544276

.
sly-m.5
for
544276

.
ath-u.5
for
ICL

.
gma-u.5
for
ICL1

.
gma-u.5
for
ICL

.
vvi-u.5
for
100248231

.
osa-u.5
for
4343441

.
zma-u.5
for
103633249

.


Ortholog ID: 6881
Species ath gma gma sly osa zma bra bra vvi tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol ICL ICL1 ICL LOC544276 LOC4343441 LOC103633249 LOC103859922 LOC103869151 LOC100248231 LOC123044645 LOC100682407 LOC123429919 LOC107893568 LOC107887472 LOC106389063 LOC106445986 CHLRE_06g282800v5 LOC8084064 LOC102581970 LOC102615372 LOC100841104 LOC107829652
Function* isocitrate lyase isocitrate lyase 1-like isocitrate lyase 2 isocitrate lyase isocitrate lyase-like isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase-like isocitrate lyase-like isocitrate lyase isocitrate lyase-like uncharacterized protein isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 4
gma01240 Biosynthesis of cofactors 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma01200 Carbon metabolism 3
gma00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 5
gma00620 Pyruvate metabolism 5
gma00010 Glycolysis / Gluconeogenesis 4
gma01200 Carbon metabolism 4
gma00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 5
sly01200 Carbon metabolism 5
sly00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 2
zma00640 Propanoate metabolism 2
zma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae01200 Carbon metabolism 6
tae00620 Pyruvate metabolism 3
tae00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae01200 Carbon metabolism 6
tae00620 Pyruvate metabolism 3
tae00640 Propanoate metabolism 3
tae00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi01200 Carbon metabolism 6
ghi00640 Propanoate metabolism 4
ghi00500 Starch and sucrose metabolism 2
ghi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00640 Propanoate metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi01200 Carbon metabolism 6
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 3
bna00640 Propanoate metabolism 3
bna01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 3
bna00640 Propanoate metabolism 3
bna01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre00620 Pyruvate metabolism 2
cre00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00460 Cyanoamino acid metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot00630 Glyoxylate and dicarboxylate metabolism 5
sot00620 Pyruvate metabolism 3
sot00071 Fatty acid degradation 2
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 3
cit00941 Flavonoid biosynthesis 2
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi00480 Glutathione metabolism 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01200 Carbon metabolism 4
nta00280 Valine, leucine and isoleucine degradation 2
nta00620 Pyruvate metabolism 2
nta00640 Propanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821726 100789036 100782793 544276 4343441 103633249 103859922 103869151 100248231 123044645 100682407 123429919 107893568 107887472 106389063 106445986 5720950 8084064 102581970 102615372 100841104 107829652
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