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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   COPZ1   nonclathrin coat protein zeta1-COP 
 gma-r.7   COPZ1   nonclathrin coat protein zeta1-COP 
 gma-m.5   COPZ1   nonclathrin coat protein zeta1-COP 
 gma-u.5   100775726   coatomer subunit zeta-1 
 gma-u.5   100527022   uncharacterized LOC100527022 
 mtr-u.5   120576909   coatomer subunit zeta-3 
 mtr-u.5   11426596   coatomer subunit zeta-1 
 mtr-u.5   25500499   coatomer subunit zeta-3 
 ppo-u.5   18096792   coatomer subunit zeta-1 
 ppo-u.5   18094824   coatomer subunit zeta-2 
 ppo-u.5   18095292   coatomer subunit zeta-1 
 ath-u.5   AT3G09800   SNARE-like superfamily protein 
 ath-u.5   AT4G08520   SNARE-like superfamily protein 
 vvi-u.5   100260697   coatomer subunit zeta-1 
 vvi-u.5   100260064   coatomer subunit zeta-1 
 sly-u.5   copz2   nonclathrin coat protein zeta2-COP 
 sly-u.5   copz1   nonclathrin coat protein zeta1-COP 
 sly-u.5   101262981   coatomer subunit zeta-2 
 osa-u.5   4329152   coatomer subunit zeta-2-like 
 osa-u.5   4327378   coatomer subunit zeta-3-like 
 osa-u.5   4339020   coatomer subunit zeta-1-like 
 zma-u.5   542595   Coatomer subunit zeta-1 
 zma-u.5   541628   Coatomer subunit zeta-2 

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Top 50 coexpressed genes to COPZ1 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to COPZ1 (gma-u.5 coexpression data)

CoexMap"547466"


gmaCOPZ1 | Entrez gene ID : 547466    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 2 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport  (52 genes)  IEA  
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  (59 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (520 genes)  IEA  
GO CC
GO:0030126 [list] [network] COPI vesicle coat  (32 genes)  IEA  
GO MF
Protein NP_001236887.1 [sequence] [blastp]
XP_040872827.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 1,  nucl 1,  E.R. 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001236887.1)
chlo 6,  E.R. 1,  cyto_E.R. 1,  cyto 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040872827.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001236887.1)
other 9  (predict for XP_040872827.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
COPZ1

.
gma-r.7
for
COPZ1

.
gma-m.5
for
COPZ1

.
gma-u.5
for
100775726

.
gma-u.5
for
100527022

.
mtr-u.5
for
120576909

.
mtr-u.5
for
11426596

.
mtr-u.5
for
25500499

.
ppo-u.5
for
18096792

.
ppo-u.5
for
18094824

.
ppo-u.5
for
18095292

.
ath-u.5
for
AT3G09800

.
ath-u.5
for
AT4G08520

.
vvi-u.5
for
100260697

.
vvi-u.5
for
100260064

.
sly-u.5
for
copz2

.
sly-u.5
for
copz1

.
sly-u.5
for
101262981

.
osa-u.5
for
4329152

.
osa-u.5
for
4327378

.
osa-u.5
for
4339020

.
zma-u.5
for
542595

.
zma-u.5
for
541628

.


Ortholog ID: 1575
Species ath gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT4G08520 LOC100775726 copz1 copz2 LOC4339020 LOC4329152 LOC542595 LOC541628 LOC103838465 LOC103870517 LOC100260697 LOC100260064 LOC18096792 LOC18095292 LOC11426596 LOC25500499 LOC123062528 LOC123079685 LOC123395922 LOC123445372 LOC107900686 LOC121230873 LOC106439187 LOC106452767 CHLRE_08g371450v5 LOC110430029 LOC110433135 LOC102599693 LOC102591694 LOC102622793 LOC102630090 LOC100838162 LOC100840047 LOC107828257 LOC107804557
Function* SNARE-like superfamily protein coatomer subunit zeta-1 nonclathrin coat protein zeta1-COP nonclathrin coat protein zeta2-COP coatomer subunit zeta-1-like coatomer subunit zeta-2-like Coatomer subunit zeta-1 Coatomer subunit zeta-2 coatomer subunit zeta-1 coatomer subunit zeta-3 coatomer subunit zeta-1 coatomer subunit zeta-1 coatomer subunit zeta-1 coatomer subunit zeta-1 coatomer subunit zeta-1 coatomer subunit zeta-3 coatomer subunit zeta-1 coatomer subunit zeta-3 coatomer subunit zeta-2 coatomer subunit zeta-1 coatomer subunit zeta-2 coatomer subunit zeta-1 coatomer subunit zeta-2 coatomer subunit zeta-3 uncharacterized protein coatomer subunit zeta-1 coatomer subunit zeta-2 coatomer subunit zeta-1-like coatomer subunit zeta-2-like coatomer subunit zeta-2-like coatomer subunit zeta-1 coatomer subunit zeta-3 coatomer subunit zeta-2 coatomer subunit zeta-1-like coatomer subunit zeta-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
ath00510 N-Glycan biosynthesis 3
ath00513 Various types of N-glycan biosynthesis 3
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly00190 Oxidative phosphorylation 2
sly04142 Lysosome 2
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa00510 N-Glycan biosynthesis 3
osa00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra00040 Pentose and glucuronate interconversions 2
bra00053 Ascorbate and aldarate metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
vvi03010 Ribosome 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi00620 Pyruvate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 4
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 3
ppo00051 Fructose and mannose metabolism 2
ppo00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 4
mtr03060 Protein export 3
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04145 Phagosome 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi04130 SNARE interactions in vesicular transport 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
ghi00100 Steroid biosynthesis 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04070 Phosphatidylinositol signaling system 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04070 Phosphatidylinositol signaling system 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 6
sbi03060 Protein export 3
sbi04145 Phagosome 3
sbi04120 Ubiquitin mediated proteolysis 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot00541 Biosynthesis of various nucleotide sugars 2
sot01250 Biosynthesis of nucleotide sugars 2
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03083 Polycomb repressive complex 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 4
nta00730 Thiamine metabolism 4
nta01232 Nucleotide metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00514 Other types of O-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826411 100775726 543512 543513 4339020 4329152 542595 541628 103838465 103870517 100260697 100260064 18096792 18095292 11426596 25500499 123062528 123079685 123395922 123445372 107900686 121230873 106439187 106452767 5726853 110430029 110433135 102599693 102591694 102622793 102630090 100838162 100840047 107828257 107804557
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