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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   1-3-1B   syringolide-induced protein 1-3-1B 
 gma-r.7   1-3-1B   syringolide-induced protein 1-3-1B 
 gma-m.5   1-3-1B   syringolide-induced protein 1-3-1B 
 gma-u.5   1-3-1A   syringolide-induced protein 1-3-1A 
 mtr-u.5   25485559   transcription factor DIVARICATA 
 ppo-u.5   7469525   transcription factor SRM1 
 ppo-u.5   7467960   transcription factor SRM1 
 ath-u.5   AT5G04760   Duplicated homeodomain-like superfamily protein 
 vvi-u.5   100263868   transcription factor SRM1 
 sly-u.5   LeMYBI   transcription factor DIVARICATA 
 sly-u.5   101262372   transcription factor SRM1 
 osa-u.5   4338925   transcription factor DIVARICATA 
 osa-u.5   4324783   transcription factor DIVARICATA 
 zma-u.5   103636453   transcription factor DIVARICATA 
 zma-u.5   103630399   uncharacterized LOC103630399 
 zma-u.5   103650973   transcription factor DIVARICATA-like 

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Top 50 coexpressed genes to 1-3-1B (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 1-3-1B (gma-u.5 coexpression data)

CoexMap"547481"


gma1-3-1B | Entrez gene ID : 547481      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 2 1 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein NP_001237103.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1  (predict for NP_001237103.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for NP_001237103.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
1-3-1B

.
gma-r.7
for
1-3-1B

.
gma-m.5
for
1-3-1B

.
gma-u.5
for
1-3-1A

.
mtr-u.5
for
25485559

.
ppo-u.5
for
7469525

.
ppo-u.5
for
7467960

.
ath-u.5
for
AT5G04760

.
vvi-u.5
for
100263868

.
sly-u.5
for
LeMYBI

.
sly-u.5
for
101262372

.
osa-u.5
for
4338925

.
osa-u.5
for
4324783

.
zma-u.5
for
103636453

.
zma-u.5
for
103630399

.
zma-u.5
for
103650973

.


Ortholog ID: 2838
Species ath gma sly sly osa zma zma bra ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi nta
Symbol AT5G04760 1-3-1B LOC101262372 LeMYBI LOC4324783 LOC103630399 LOC103650973 LOC103850559 LOC7467960 LOC7469525 LOC25485559 LOC123071514 LOC123150896 LOC123440490 LOC107889182 LOC107891532 LOC106358534 LOC111203881 LOC8072504 LOC8062365 LOC102582848 LOC102599589 LOC102624360 LOC102626223 LOC100835709 LOC107782691
Function* Duplicated homeodomain-like superfamily protein syringolide-induced protein 1-3-1B transcription factor SRM1 transcription factor DIVARICATA transcription factor DIVARICATA uncharacterized LOC103630399 transcription factor DIVARICATA-like transcription factor DIVARICATA transcription factor SRM1 transcription factor SRM1 transcription factor DIVARICATA transcription factor DIVARICATA transcription factor DIVARICATA transcription factor DIVARICATA-like transcription factor SRM1 transcription factor SRM1 transcription factor DIVARICATA-like transcription factor DIVARICATA-like transcription factor DIVARICATA transcription factor DIVARICATA transcription factor DIVARICATA-like transcription factor DIVARICATA-like transcription factor SRM1-like transcription factor SRM1 transcription factor DIVARICATA transcription factor SRM1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 9
zma04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00330 Arginine and proline metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00071 Fatty acid degradation 4
ghi00280 Valine, leucine and isoleucine degradation 4
ghi01212 Fatty acid metabolism 4
ghi00052 Galactose metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 7
ghi00380 Tryptophan metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi01200 Carbon metabolism 5
ghi04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00280 Valine, leucine and isoleucine degradation 2
cit00270 Cysteine and methionine metabolism 2
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 3
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830354 547481 101262372 543742 4324783 103630399 103650973 103850559 7467960 7469525 25485559 123071514 123150896 123440490 107889182 107891532 106358534 111203881 8072504 8062365 102582848 102599589 102624360 102626223 100835709 107782691
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