Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   547529   probable transcriptional regulator SLK2 
 gma-r.7   547529   probable transcriptional regulator SLK2 
 gma-m.5   547529   probable transcriptional regulator SLK2 
 gma-u.5   100816886   probable transcriptional regulator SLK2 
 gma-u.5   100789452   probable transcriptional regulator SLK2 
 mtr-u.5   120575899   probable transcriptional regulator SLK2 
 ppo-u.5   7454480   probable transcriptional regulator SLK2 
 ppo-u.5   18103960   probable transcriptional regulator SLK2 
 ath-u.5   SLK3   SEUSS-like 3 
 ath-u.5   SLK1   SEUSS-like 1 
 ath-u.5   SLK2   SEUSS-like 2 
 vvi-u.5   100265879   probable transcriptional regulator SLK2 
 vvi-u.5   100254797   probable transcriptional regulator SLK2 
 sly-u.5   SEU2   transcriptional corepressor SEU2 
 osa-u.5   4339967   probable transcriptional regulator SLK3 
 zma-u.5   100502315   uncharacterized LOC100502315 
 zma-u.5   100383356   putative transcriptional regulator SLK2 
 zma-u.5   100280226   uncharacterized LOC100280226 

close


Top 50 coexpressed genes to 547529 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 547529 (gma-u.5 coexpression data)

CoexMap"547529"


gmaLOC547529 | Entrez gene ID : 547529      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 1 2 3 2 1 1 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (35 genes)  IEA  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (294 genes)  IEA  
GO CC
GO:0005667 [list] [network] transcription regulator complex  (244 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
Protein XP_003548219.1 [sequence] [blastp]
XP_040866546.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_003548219.1)
chlo 6,  nucl 4  (predict for XP_040866546.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_003548219.1)
chlo 3  (predict for XP_040866546.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
547529

.
gma-r.7
for
547529

.
gma-m.5
for
547529

.
gma-u.5
for
100816886

.
gma-u.5
for
100789452

.
mtr-u.5
for
120575899

.
ppo-u.5
for
7454480

.
ppo-u.5
for
18103960

.
ath-u.5
for
SLK3

.
ath-u.5
for
SLK1

.
ath-u.5
for
SLK2

.
vvi-u.5
for
100265879

.
vvi-u.5
for
100254797

.
sly-u.5
for
SEU2

.
osa-u.5
for
4339967

.
zma-u.5
for
100502315

.
zma-u.5
for
100383356

.
zma-u.5
for
100280226

.


Ortholog ID: 2664
Species ath ath gma gma sly osa zma zma bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol SLK2 SLK3 LOC547529 LOC100789452 SEU2 LOC4339967 LOC100502315 LOC100383356 LOC103861563 LOC100254797 LOC100265879 LOC7454480 LOC18103960 LOC120575899 LOC123149570 LOC123162671 LOC123413641 LOC123412891 LOC107947293 LOC107923489 LOC106418256 LOC125601363 LOC110431238 LOC8081171 LOC102584857 LOC102621625 LOC100842018 LOC107797288 LOC107811376
Function* SEUSS-like 2 SEUSS-like 3 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 transcriptional corepressor SEU2 probable transcriptional regulator SLK3 uncharacterized LOC100502315 putative transcriptional regulator SLK2 probable transcriptional regulator SLK1 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK3 probable transcriptional regulator SLK3 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK1 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK3 putative transcriptional regulator SLK2 putative transcriptional regulator SLK2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly03250 Viral life cycle - HIV-1 2
sly03272 Virion - Hepatitis viruses 2
sly04144 Endocytosis 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 3
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836329 828656 547529 100789452 101265803 4339967 100502315 100383356 103861563 100254797 100265879 7454480 18103960 120575899 123149570 123162671 123413641 123412891 107947293 107923489 106418256 125601363 110431238 8081171 102584857 102621625 100842018 107797288 107811376
The preparation time of this page was 0.3 [sec].