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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   EF1BGAMMA4   elongation factor 1-gamma 
 gma-r.7   EF1BGAMMA4   elongation factor 1-gamma 
 gma-m.5   EF1BGAMMA4   elongation factor 1-gamma 
 gma-u.5   EF1BGAMMA1   elongation factor 1-gamma-like 
 gma-u.5   EF1BGAMMA2   elongation factor 1-gamma-like 
 gma-u.5   EF1BGAMMA3   EF1Bgamma class glutathione S-transferase 
 mtr-u.5   25494379   elongation factor 1-gamma 
 mtr-u.5   25489145   elongation factor 1-gamma 
 mtr-u.5   11419764   elongation factor 1-gamma 
 ppo-u.5   7475774   elongation factor 1-gamma 
 ppo-u.5   18111142   elongation factor 1-gamma 
 ppo-u.5   18098338   elongation factor 1-gamma 2 
 ath-u.5   AT1G09640   Translation elongation factor EF1B, gamma chain 
 ath-u.5   AT1G57720   Translation elongation factor EF1B, gamma chain 
 vvi-u.5   100264325   elongation factor 1-gamma 
 vvi-u.5   100246571   elongation factor 1-gamma 
 sly-u.5   101249702   elongation factor 1-gamma 2 
 sly-u.5   101248107   elongation factor 1-gamma 2 
 osa-u.5   4341354   elongation factor 1-gamma 3-like 
 osa-u.5   4328752   elongation factor 1-gamma 2-like 
 osa-u.5   4328753   elongation factor 1-gamma 1-like 
 zma-u.5   100284862   elongation factor 1-gamma 2 
 zma-u.5   100381466   putative elongation factor 1-gamma 2 
 zma-u.5   100192872   Elongation factor gamma1 

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Top 50 coexpressed genes to EF1BGAMMA4 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to EF1BGAMMA4 (gma-u.5 coexpression data)

CoexMap"547637"


gmaEF1BGAMMA4 | Entrez gene ID : 547637      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 3 2 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006414 [list] [network] translational elongation  (65 genes)  IEA  
GO CC
GO MF
GO:0003746 [list] [network] translation elongation factor activity  (46 genes)  IEA  
GO:0004364 [list] [network] glutathione transferase activity  (83 genes)  IEA  
Protein NP_001235707.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1  (predict for NP_001235707.2)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for NP_001235707.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
EF1BGAMMA4

.
gma-r.7
for
EF1BGAMMA4

.
gma-m.5
for
EF1BGAMMA4

.
gma-u.5
for
EF1BGAMMA1

.
gma-u.5
for
EF1BGAMMA2

.
gma-u.5
for
EF1BGAMMA3

.
mtr-u.5
for
25494379

.
mtr-u.5
for
25489145

.
mtr-u.5
for
11419764

.
ppo-u.5
for
7475774

.
ppo-u.5
for
18111142

.
ppo-u.5
for
18098338

.
ath-u.5
for
AT1G09640

.
ath-u.5
for
AT1G57720

.
vvi-u.5
for
100264325

.
vvi-u.5
for
100246571

.
sly-u.5
for
101249702

.
sly-u.5
for
101248107

.
osa-u.5
for
4341354

.
osa-u.5
for
4328752

.
osa-u.5
for
4328753

.
zma-u.5
for
100284862

.
zma-u.5
for
100381466

.
zma-u.5
for
100192872

.


Ortholog ID: 3160
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G09640 AT1G57720 EF1BGAMMA2 EF1BGAMMA4 LOC101248107 LOC101249702 LOC4328752 LOC4328753 LOC100381466 LOC100282446 LOC103843341 LOC103836321 LOC100246571 LOC100264325 LOC7475774 LOC18098338 LOC25494379 LOC11419764 LOC123148040 LOC123411776 LOC107928364 LOC107928401 LOC106346260 LOC106401045 LOC8085532 LOC8079301 LOC102580230 LOC102578147 LOC102621285 LOC102609380 LOC100841544 LOC100832936 LOC107766924 LOC107827359
Function* Translation elongation factor EF1B, gamma chain Translation elongation factor EF1B, gamma chain elongation factor 1-gamma-like elongation factor 1-gamma elongation factor 1-gamma 2 elongation factor 1-gamma 2 elongation factor 1-gamma 2-like elongation factor 1-gamma 1-like putative elongation factor 1-gamma 2 elongation factor 1-gamma 3 probable elongation factor 1-gamma 1 probable elongation factor 1-gamma 1 elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma 2 elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma 2 elongation factor 1-gamma 2-like elongation factor 1-gamma elongation factor 1-gamma probable elongation factor 1-gamma 1 probable elongation factor 1-gamma 1 elongation factor 1-gamma 2 elongation factor 1-gamma 3 elongation factor 1-gamma 2-like elongation factor 1-gamma 2 elongation factor 1-gamma-like elongation factor 1-gamma-like elongation factor 1-gamma 2 elongation factor 1-gamma 3 elongation factor 1-gamma 2-like elongation factor 1-gamma 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma01230 Biosynthesis of amino acids 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03060 Protein export 2
gma00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
osa03060 Protein export 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
zma03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot01230 Biosynthesis of amino acids 3
sot00010 Glycolysis / Gluconeogenesis 2
sot01200 Carbon metabolism 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00010 Glycolysis / Gluconeogenesis 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 6
bdi00510 N-Glycan biosynthesis 3
bdi00513 Various types of N-glycan biosynthesis 3
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837491 842147 100795680 547637 101248107 101249702 4328752 4328753 100381466 100282446 103843341 103836321 100246571 100264325 7475774 18098338 25494379 11419764 123148040 123411776 107928364 107928401 106346260 106401045 8085532 8079301 102580230 102578147 102621285 102609380 100841544 100832936 107766924 107827359
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