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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   547668   nodulin homeobox 
 gma-r.7   547668   nodulin homeobox 
 gma-m.5   547668   nodulin homeobox 
 gma-u.5   100781915   nodulin homeobox 
 mtr-u.5   11417431   nodulin homeobox 
 mtr-u.5   11412805   nodulin homeobox 
 ppo-u.5   7457975   nodulin homeobox 
 ppo-u.5   7481453   nodulin homeobox 
 ath-u.5   AT4G03090   sequence-specific DNA binding transcription factor ATNDX 
 vvi-u.5   100259581   nodulin homeobox 
 sly-u.5   101264065   nodulin homeobox 
 osa-u.5   9268582   nodulin homeobox 
 zma-u.5   100501975   uncharacterized LOC100501975 
 zma-u.5   100384237   Nodulin homeobox 

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Top 50 coexpressed genes to 547668 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 547668 (gma-u.5 coexpression data)

CoexMap"547668"


gmaLOC547668 | Entrez gene ID : 547668      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009908 [list] [network] flower development  (58 genes)  IEA  
GO CC
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (161 genes)  IEA  
Protein XP_006597288.1 [sequence] [blastp]
XP_006597289.1 [sequence] [blastp]
XP_006597292.1 [sequence] [blastp]
XP_006597293.1 [sequence] [blastp]
XP_006597294.1 [sequence] [blastp]
XP_006597295.1 [sequence] [blastp]
XP_040865778.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2  (predict for XP_006597288.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2  (predict for XP_006597289.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2  (predict for XP_006597292.1)
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2  (predict for XP_006597293.1)
nucl 5,  cyto 3,  nucl_plas 3  (predict for XP_006597294.1)
nucl 5,  cyto 2,  chlo 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_006597295.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2  (predict for XP_040865778.1)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for XP_006597288.1)
scret 5,  other 4  (predict for XP_006597289.1)
scret 5,  other 4  (predict for XP_006597292.1)
scret 5,  other 4  (predict for XP_006597293.1)
scret 5,  other 4  (predict for XP_006597294.1)
scret 5,  other 4  (predict for XP_006597295.1)
scret 5,  other 4  (predict for XP_040865778.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
547668

.
gma-r.7
for
547668

.
gma-m.5
for
547668

.
gma-u.5
for
100781915

.
mtr-u.5
for
11417431

.
mtr-u.5
for
11412805

.
ppo-u.5
for
7457975

.
ppo-u.5
for
7481453

.
ath-u.5
for
AT4G03090

.
vvi-u.5
for
100259581

.
sly-u.5
for
101264065

.
osa-u.5
for
9268582

.
zma-u.5
for
100501975

.
zma-u.5
for
100384237

.


Ortholog ID: 7666
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna sbi sot cit bdi bdi nta nta
Symbol AT4G03090 LOC547668 LOC100781915 LOC101264065 LOC9268582 LOC100501975 LOC100384237 LOC103846915 LOC100259581 LOC7481453 LOC7457975 LOC11412805 LOC11417431 LOC123055387 LOC123191202 LOC123431450 LOC107931153 LOC107903386 LOC106389976 LOC8068350 LOC102594863 LOC102620367 LOC100839444 LOC100829045 LOC107800856 LOC107785857
Function* sequence-specific DNA binding transcription factor ATNDX nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox uncharacterized LOC100501975 Nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox hypothetical protein nodulin homeobox nodulin homeobox nodulin homeobox nodulin homeobox
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03008 Ribosome biogenesis in eukaryotes 2
gma03250 Viral life cycle - HIV-1 2
gma03040 Spliceosome 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 7
gma00510 N-Glycan biosynthesis 5
gma00513 Various types of N-glycan biosynthesis 5
gma00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma00260 Glycine, serine and threonine metabolism 2
zma00460 Cyanoamino acid metabolism 2
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 5
ppo03040 Spliceosome 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828094 547668 100781915 101264065 9268582 100501975 100384237 103846915 100259581 7481453 7457975 11412805 11417431 123055387 123191202 123431450 107931153 107903386 106389976 8068350 102594863 102620367 100839444 100829045 107800856 107785857
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