Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   FAD3A   microsomal omega-3-fatty acid desaturase 
 gma-r.7   FAD3A   microsomal omega-3-fatty acid desaturase 
 gma-u.5   FAD7-2   omega-3 fatty acid desaturase, chloroplastic 
 gma-u.5   FAD7-1   omega-3 fatty acid desaturase 
 gma-u.5   FAD8-1   omega-3 fatty acid desaturase 
 mtr-u.5   11411563   omega-3 fatty acid desaturase, chloroplastic 
 mtr-u.5   11415576   omega-3 fatty acid desaturase, endoplasmic reticulum 
 mtr-u.5   25498767   omega-3 fatty acid desaturase, chloroplastic 
 ppo-u.5   7478523   acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum 
 ppo-u.5   7468059   omega-3 fatty acid desaturase, chloroplastic 
 ppo-u.5   7466077   omega-3 fatty acid desaturase, chloroplastic 
 ath-u.5   FAD3   fatty acid desaturase 3 
 ath-u.5   FAD8   fatty acid desaturase 8 
 ath-u.5   FAD7   fatty acid desaturase 7 
 vvi-u.5   100243349   acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum 
 vvi-u.5   100247097   omega-3 fatty acid desaturase, chloroplastic 
 sly-u.5   Fad7   omega-3 fatty acid desaturase 
 sly-u.5   100134915   omega-3 fatty acid desaturase 
 osa-u.5   4351253   fatty acid desaturase DES3 
 osa-u.5   4349544   fatty acid desaturase DES3 
 osa-u.5   4332500   omega-3 fatty acid desaturase, endoplasmic reticulum 
 zma-u.5   100281245   omega-3 fatty acid desaturase 
 zma-u.5   103644592   omega-3 fatty acid desaturase, chloroplastic 
 zma-u.5   542222   fatty acid desaturase 7 

close


Top 50 coexpressed genes to FAD3A (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to FAD3A (gma-u.5 coexpression data)

CoexMap"547715"


gmaFAD3A | Entrez gene ID : 547715      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006636 [list] [network] unsaturated fatty acid biosynthetic process  (4 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (219 genes)  IEA  
GO MF
GO:0042389 [list] [network] omega-3 fatty acid desaturase activity  (4 genes)  IEA  
GO:0016717 [list] [network] oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water  (29 genes)  IEA  
Protein NP_001236783.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  E.R. 4,  golg 1  (predict for NP_001236783.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001236783.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
FAD3A

.
gma-r.7
for
FAD3A

.
gma-u.5
for
FAD7-2

.
gma-u.5
for
FAD7-1

.
gma-u.5
for
FAD8-1

.
mtr-u.5
for
11411563

.
mtr-u.5
for
11415576

.
mtr-u.5
for
25498767

.
ppo-u.5
for
7478523

.
ppo-u.5
for
7468059

.
ppo-u.5
for
7466077

.
ath-u.5
for
FAD3

.
ath-u.5
for
FAD8

.
ath-u.5
for
FAD7

.
vvi-u.5
for
100243349

.
vvi-u.5
for
100247097

.
sly-u.5
for
Fad7

.
sly-u.5
for
100134915

.
osa-u.5
for
4351253

.
osa-u.5
for
4349544

.
osa-u.5
for
4332500

.
zma-u.5
for
100281245

.
zma-u.5
for
103644592

.
zma-u.5
for
542222

.


Ortholog ID: 865
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol FAD7 FAD3 FAD8.2 FAD3B LOC100134915 LOC4351253 LOC4344389 LOC542222 LOC100281245 LOC103867994 LOC103850591 LOC100247097 LOC100260414 LOC7490323 LOC7468059 LOC11415576 LOC11411563 LOC123085571 LOC123086342 LOC123395843 LOC123424595 LOC107940880 LOC107958053 LOC111197728 LOC106377255 CHLRE_01g038600v5 LOC8084992 LOC102597672 LOC102596735 LOC102611986 LOC102626347 LOC100840287 LOC100824939 LOC107786526 LOC107832399
Function* fatty acid desaturase 7 fatty acid desaturase 3 omega-3 fatty acid desaturase, chloroplastic omega-3 fatty acid desaturase, endoplasmic reticulum omega-3 fatty acid desaturase fatty acid desaturase DES3 omega-3 fatty acid desaturase, chloroplastic fatty acid desaturase 7 omega-3 fatty acid desaturase acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum temperature-sensitive sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic omega-3 fatty acid desaturase, chloroplastic omega-3 fatty acid desaturase, chloroplastic omega-3 fatty acid desaturase, chloroplastic omega-3 fatty acid desaturase, chloroplastic omega-3 fatty acid desaturase, endoplasmic reticulum omega-3 fatty acid desaturase, chloroplastic omega-3 fatty acid desaturase, chloroplastic fatty acid desaturase DES3 fatty acid desaturase DES3-like omega-3 fatty acid desaturase, chloroplastic-like acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum-like omega-3 fatty acid desaturase, chloroplastic-like omega-3 fatty acid desaturase, chloroplastic-like omega-3 fatty acid desaturase, endoplasmic reticulum-like uncharacterized protein temperature-sensitive sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic omega-3 fatty acid desaturase, chloroplastic-like omega-3 fatty acid desaturase, endoplasmic reticulum-like omega-3 fatty acid desaturase, chloroplastic-like acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum-like omega-3 fatty acid desaturase, chloroplastic fatty acid desaturase DES3 omega-3 fatty acid desaturase, endoplasmic reticulum-like omega-3 fatty acid desaturase, chloroplastic-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath00710 Carbon fixation by Calvin cycle 3
ath01200 Carbon metabolism 3
ath00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma00710 Carbon fixation by Calvin cycle 4
gma00020 Citrate cycle (TCA cycle) 3
gma00270 Cysteine and methionine metabolism 3
gma00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00240 Pyrimidine metabolism 3
sly01232 Nucleotide metabolism 3
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01250 Biosynthesis of nucleotide sugars 5
osa00520 Amino sugar and nucleotide sugar metabolism 4
osa00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 3
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 4
ppo00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00260 Glycine, serine and threonine metabolism 4
mtr00630 Glyoxylate and dicarboxylate metabolism 4
mtr01200 Carbon metabolism 4
mtr00670 One carbon pool by folate 3
mtr01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
tae00591 Linoleic acid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01212 Fatty acid metabolism 3
cre01240 Biosynthesis of cofactors 2
cre00061 Fatty acid biosynthesis 2
cre01040 Biosynthesis of unsaturated fatty acids 2
cre00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 3
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
cit04016 MAPK signaling pathway - plant 2
cit04070 Phosphatidylinositol signaling system 2
cit04626 Plant-pathogen interaction 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 4
bdi01200 Carbon metabolism 4
bdi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
nta01230 Biosynthesis of amino acids 3
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820288 817548 100799517 100037456 100134915 4351253 4344389 542222 100281245 103867994 103850591 100247097 100260414 7490323 7468059 11415576 11411563 123085571 123086342 123395843 123424595 107940880 107958053 111197728 106377255 5715517 8084992 102597672 102596735 102611986 102626347 100840287 100824939 107786526 107832399
The preparation time of this page was 0.2 [sec].