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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   GSA1   glutamate 1-semialdehyde aminotransferase 
 gma-r.7   GSA1   glutamate 1-semialdehyde aminotransferase 
 gma-m.5   GSA1   glutamate 1-semialdehyde aminotransferase 
 gma-u.5   100790574   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 mtr-u.5   11420447   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 ppo-u.5   7456623   glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic 
 ath-u.5   GSA2   glutamate-1-semialdehyde 2,1-aminomutase 2 
 ath-u.5   GSA1   glutamate-1-semialdehyde-2,1-aminomutase 
 vvi-u.5   100250737   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 
 sly-u.5   GSA-AT   glutamate 1-semialdehyde 2,1-aminomutase 
 osa-u.5   4346136   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 
 zma-u.5   100193482   Glutamate-1-semialdehyde 21-aminomutase 2 chloroplastic 

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Top 50 coexpressed genes to GSA1 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GSA1 (gma-u.5 coexpression data)

CoexMap"547795"


gmaGSA1 | Entrez gene ID : 547795      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00860 [list] [network] Porphyrin metabolism (98 genes)
gmx01240 [list] [network] Biosynthesis of cofactors (475 genes)
GO BP
GO:0033014 [list] [network] tetrapyrrole biosynthetic process  (63 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0042286 [list] [network] glutamate-1-semialdehyde 2,1-aminomutase activity  (2 genes)  IEA  
GO:0008483 [list] [network] transaminase activity  (91 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (149 genes)  IEA  
Protein NP_001238043.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001238043.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for NP_001238043.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
GSA1

.
gma-r.7
for
GSA1

.
gma-m.5
for
GSA1

.
gma-u.5
for
100790574

.
mtr-u.5
for
11420447

.
ppo-u.5
for
7456623

.
ath-u.5
for
GSA2

.
ath-u.5
for
GSA1

.
vvi-u.5
for
100250737

.
sly-u.5
for
GSA-AT

.
osa-u.5
for
4346136

.
zma-u.5
for
100193482

.


Ortholog ID: 6891
Species ath ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol GSA1 GSA2 LOC100790574 GSA1 GSA-AT LOC4346136 LOC100193482 LOC103837478 LOC103873768 LOC100250737 LOC7456623 LOC11420447 LOC123164340 LOC123151833 LOC123407287 LOC107926284 LOC121215506 LOC106410774 LOC106348318 CHLRE_03g158000v5 LOC110430175 LOC102593524 LOC102627733 LOC100845106 LOC107769957 LOC107815022
Function* glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate 1-semialdehyde aminotransferase glutamate 1-semialdehyde 2,1-aminomutase glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like Glutamate-1-semialdehyde 21-aminomutase 2 chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like uncharacterized protein glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 9
ath01240 Biosynthesis of cofactors 9
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 9
ath01240 Biosynthesis of cofactors 7
ath03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 6
gma01240 Biosynthesis of cofactors 6
gma03010 Ribosome 5
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 7
gma01240 Biosynthesis of cofactors 7
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
sly01240 Biosynthesis of cofactors 5
sly00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 5
osa00860 Porphyrin metabolism 4
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
zma03010 Ribosome 3
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra03040 Spliceosome 3
bra04141 Protein processing in endoplasmic reticulum 3
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra03018 RNA degradation 2
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi03010 Ribosome 3
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 4
ppo00270 Cysteine and methionine metabolism 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 6
tae01240 Biosynthesis of cofactors 6
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 9
tae01240 Biosynthesis of cofactors 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 9
ghi01240 Biosynthesis of cofactors 7
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 10
bna01240 Biosynthesis of cofactors 10
bna04016 MAPK signaling pathway - plant 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 11
bna01240 Biosynthesis of cofactors 11
bna00970 Aminoacyl-tRNA biosynthesis 3
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 11
cre01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 6
sbi01240 Biosynthesis of cofactors 5
sbi03010 Ribosome 3
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 5
sot00860 Porphyrin metabolism 4
sot03018 RNA degradation 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00250 Alanine, aspartate and glutamate metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 4
bdi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03060 Protein export 2
nta00908 Zeatin biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836476 824034 100790574 547795 543967 4346136 100193482 103837478 103873768 100250737 7456623 11420447 123164340 123151833 123407287 107926284 121215506 106410774 106348318 5723033 110430175 102593524 102627733 100845106 107769957 107815022
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