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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   ACCA-1   alpha-carboxyltransferase aCT-1 precursor 
 gma-r.7   ACCA-1   alpha-carboxyltransferase aCT-1 precursor 
 gma-m.5   ACCA-1   alpha-carboxyltransferase aCT-1 precursor 
 gma-u.5   ACCA-2   alfa-carboxyltransferase precursor 
 gma-u.5   ACCA-3   carboxyl transferase alpha subunit 
 mtr-u.5   25498718   acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic 
 ppo-u.5   7487293   acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic 
 ppo-u.5   7466043   acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic 
 ppo-u.5   7464921   acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic 
 ath-u.5   CAC3   acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit 
 vvi-u.5   100256854   acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic 
 vvi-u.5   100266499   acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic 
 sly-u.5   101256513   acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic 
 sly-u.5   101248139   acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic 

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Top 50 coexpressed genes to ACCA-1 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ACCA-1 (gma-u.5 coexpression data)

CoexMap"547859"


gmaACCA-1 | Entrez gene ID : 547859      
Species gma mtr ppo ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 5 1 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00061 [list] [network] Fatty acid biosynthesis (77 genes)
gmx00620 [list] [network] Pyruvate metabolism (209 genes)
gmx00640 [list] [network] Propanoate metabolism (64 genes)
gmx01200 [list] [network] Carbon metabolism (489 genes)
gmx01212 [list] [network] Fatty acid metabolism (121 genes)
GO BP
GO:0006633 [list] [network] fatty acid biosynthetic process  (154 genes)  IEA  
GO CC
GO:0009317 [list] [network] acetyl-CoA carboxylase complex  (8 genes)  IEA  
GO MF
GO:0016743 [list] [network] carboxyl- or carbamoyltransferase activity  (10 genes)  IEA  
GO:0003989 [list] [network] acetyl-CoA carboxylase activity  (11 genes)  IEA  
Protein NP_001235234.2 [sequence] [blastp]
NP_001388123.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 2  (predict for NP_001235234.2)
chlo 7,  cyto 2  (predict for NP_001388123.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001235234.2)
chlo 9  (predict for NP_001388123.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
ACCA-1

.
gma-r.7
for
ACCA-1

.
gma-m.5
for
ACCA-1

.
gma-u.5
for
ACCA-2

.
gma-u.5
for
ACCA-3

.
mtr-u.5
for
25498718

.
ppo-u.5
for
7487293

.
ppo-u.5
for
7466043

.
ppo-u.5
for
7464921

.
ath-u.5
for
CAC3

.
vvi-u.5
for
100256854

.
vvi-u.5
for
100266499

.
sly-u.5
for
101256513

.
sly-u.5
for
101248139

.


Ortholog ID: 6835
Species ath gma gma sly sly bra bra vvi vvi ppo ppo mtr ghi ghi bna bna cre sot sot cit nta nta
Symbol CAC3 ACCA-1 ACCA-3 LOC101256513 LOC101248139 LOC103867140 LOC103857757 LOC100266499 LOC100256854 LOC7466043 LOC7487293 LOC25498718 LOC107948866 LOC107920246 LOC106438168 LOC106354759 CHLRE_12g519100v5 LOC102584328 LOC102583167 LOC102608822 LOC107785788 LOC107789406
Function* acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit alpha-carboxyltransferase aCT-1 precursor carboxyl transferase alpha subunit acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic uncharacterized protein acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 11
ath01200 Carbon metabolism 11
ath00010 Glycolysis / Gluconeogenesis 8
ath00785 Lipoic acid metabolism 8
ath00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 11
gma00620 Pyruvate metabolism 10
gma00010 Glycolysis / Gluconeogenesis 6
gma00061 Fatty acid biosynthesis 5
gma01212 Fatty acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 13
gma01212 Fatty acid metabolism 13
gma00620 Pyruvate metabolism 9
gma01200 Carbon metabolism 9
gma01240 Biosynthesis of cofactors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 9
sly01200 Carbon metabolism 9
sly00010 Glycolysis / Gluconeogenesis 7
sly00020 Citrate cycle (TCA cycle) 7
sly00785 Lipoic acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 2
sly00640 Propanoate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 13
bra01200 Carbon metabolism 13
bra00010 Glycolysis / Gluconeogenesis 9
bra00061 Fatty acid biosynthesis 7
bra01212 Fatty acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 14
bra01200 Carbon metabolism 14
bra00061 Fatty acid biosynthesis 8
bra00640 Propanoate metabolism 8
bra01212 Fatty acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 8
vvi00620 Pyruvate metabolism 8
vvi01200 Carbon metabolism 8
vvi01212 Fatty acid metabolism 7
vvi00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi03018 RNA degradation 2
vvi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00620 Pyruvate metabolism 6
ppo00640 Propanoate metabolism 6
ppo01200 Carbon metabolism 6
ppo00061 Fatty acid biosynthesis 5
ppo01212 Fatty acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00620 Pyruvate metabolism 8
ppo01200 Carbon metabolism 8
ppo00640 Propanoate metabolism 7
ppo01240 Biosynthesis of cofactors 7
ppo00061 Fatty acid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00620 Pyruvate metabolism 5
mtr01200 Carbon metabolism 5
mtr03010 Ribosome 3
mtr00061 Fatty acid biosynthesis 3
mtr01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 8
ghi01200 Carbon metabolism 8
ghi00010 Glycolysis / Gluconeogenesis 5
ghi00061 Fatty acid biosynthesis 5
ghi01212 Fatty acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 7
ghi01200 Carbon metabolism 7
ghi00061 Fatty acid biosynthesis 5
ghi01212 Fatty acid metabolism 5
ghi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 12
bna00620 Pyruvate metabolism 10
bna01200 Carbon metabolism 10
bna00640 Propanoate metabolism 8
bna01212 Fatty acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 8
bna00620 Pyruvate metabolism 5
bna01200 Carbon metabolism 5
bna00640 Propanoate metabolism 4
bna01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 9
cre00620 Pyruvate metabolism 8
cre00061 Fatty acid biosynthesis 7
cre01212 Fatty acid metabolism 7
cre00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 2
sot00640 Propanoate metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 7
sot01212 Fatty acid metabolism 7
sot00620 Pyruvate metabolism 6
sot01200 Carbon metabolism 6
sot01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00620 Pyruvate metabolism 3
cit01200 Carbon metabolism 3
cit00061 Fatty acid biosynthesis 3
cit01212 Fatty acid metabolism 3
cit00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 9
nta01212 Fatty acid metabolism 9
nta00620 Pyruvate metabolism 8
nta01200 Carbon metabolism 8
nta00640 Propanoate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 8
nta00620 Pyruvate metabolism 8
nta01200 Carbon metabolism 8
nta01212 Fatty acid metabolism 8
nta00640 Propanoate metabolism 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818382 547859 100037449 101256513 101248139 103867140 103857757 100266499 100256854 7466043 7487293 25498718 107948866 107920246 106438168 106354759 5722616 102584328 102583167 102608822 107785788 107789406
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