Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   RNF12   RING-H2 finger protein 
 gma-r.7   RNF12   RING-H2 finger protein 
 gma-m.5   RNF12   RING-H2 finger protein 
 gma-u.5   100814695   probable E3 ubiquitin-protein ligase RHY1A 
 mtr-u.5   25485358   probable E3 ubiquitin-protein ligase RHY1A 
 ppo-u.5   18095179   probable E3 ubiquitin-protein ligase RHY1A 
 ppo-u.5   18102089   probable E3 ubiquitin-protein ligase RHY1A 
 ath-u.5   AT1G49850   RING/U-box superfamily protein 
 vvi-u.5   100249808   probable E3 ubiquitin-protein ligase RHY1A 
 sly-u.5   101244425   RING-H2 finger protein 
 osa-u.5   4332001   probable E3 ubiquitin-protein ligase RHY1A 
 zma-u.5   100216754   putative RING zinc finger domain superfamily protein 
 zma-u.5   100274167   putative RING zinc finger domain superfamily protein 

close


Top 50 coexpressed genes to RNF12 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to RNF12 (gma-u.5 coexpression data)

CoexMap"548042"


gmaRNF12 | Entrez gene ID : 548042      
Species gma mtr ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001237884.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1  (predict for NP_001237884.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001237884.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
RNF12

.
gma-r.7
for
RNF12

.
gma-m.5
for
RNF12

.
gma-u.5
for
100814695

.
mtr-u.5
for
25485358

.
ppo-u.5
for
18095179

.
ppo-u.5
for
18102089

.
ath-u.5
for
AT1G49850

.
vvi-u.5
for
100249808

.
sly-u.5
for
101244425

.
osa-u.5
for
4332001

.
zma-u.5
for
100216754

.
zma-u.5
for
100274167

.


Ortholog ID: 7065
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G49850 LOC100814695 RNF12 LOC101244425 LOC4332001 LOC100216754 LOC100274167 LOC103849551 LOC103832912 LOC100249808 LOC18102089 LOC18095179 LOC25485358 LOC123093052 LOC123085014 LOC123449376 LOC107894312 LOC107938392 LOC125609567 LOC106399346 LOC8081858 LOC102592559 LOC102616524 LOC100821857 LOC107812356 LOC107796169
Function* RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHY1A RING-H2 finger protein RING-H2 finger protein probable E3 ubiquitin-protein ligase RHY1A putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A E3 ubiquitin ligase BIG BROTHER-related probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A putative E3 ubiquitin-protein ligase RHY1A putative E3 ubiquitin-protein ligase RHY1A
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 5
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01040 Biosynthesis of unsaturated fatty acids 2
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi04144 Endocytosis 2
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841408 100814695 548042 101244425 4332001 100216754 100274167 103849551 103832912 100249808 18102089 18095179 25485358 123093052 123085014 123449376 107894312 107938392 125609567 106399346 8081858 102592559 102616524 100821857 107812356 107796169
The preparation time of this page was 0.1 [sec].