Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g011350v5   uncharacterized protein 
 ath-u.5   TAF11   TBP-associated factor 11 
 gma-u.5   100305481   TBP-associated factor 11-like protein 
 sly-u.5   101252686   transcription initiation factor TFIID subunit 11 
 osa-u.5   4325286   transcription initiation factor TFIID subunit 11 
 zma-u.5   100286233   transcription initiation factor TFIID subunit 11 
 zma-u.5   100285251   transcription initiation factor TFIID subunit 11 
 vvi-u.5   100249829   transcription initiation factor TFIID subunit 11 
 ppo-u.5   7465380   uncharacterized LOC7465380 
 ppo-u.5   7491456   transcription initiation factor TFIID subunit 11 
 mtr-u.5   25483108   transcription initiation factor TFIID subunit 11 

close


Top 50 coexpressed genes to CHLRE_01g011350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_01g011350v5 (cre-r.1 coexpression data)

CoexMap"5715030"


creCHLRE_01g011350v5 | Entrez gene ID : 5715030      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03022 [list] [network] Basal transcription factors (19 genes)
GO BP
GO:0051123 [list] [network] RNA polymerase II preinitiation complex assembly  (9 genes)  IEA  
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (25 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (14 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (26 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (139 genes)  IEA  
Protein XP_042928222.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  cyto 1,  cyto_mito 1,  cyto_pero 1,  mito_plas 1  (predict for XP_042928222.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042928222.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g011350v5

.
ath-u.5
for
TAF11

.
gma-u.5
for
100305481

.
sly-u.5
for
101252686

.
osa-u.5
for
4325286

.
zma-u.5
for
100286233

.
zma-u.5
for
100285251

.
vvi-u.5
for
100249829

.
ppo-u.5
for
7465380

.
ppo-u.5
for
7491456

.
mtr-u.5
for
25483108

.


Ortholog ID: 5547
Species ath gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol TAF11 LOC100305481 LOC101252686 LOC4325286 LOC100286233 LOC100285251 LOC103858067 LOC100249829 LOC7491456 LOC7465380 LOC25483108 LOC123078975 LOC123070564 LOC123444112 LOC107960838 LOC107896635 LOC106376468 CHLRE_01g011350v5 LOC8068019 LOC102604061 LOC102619164 LOC100838901 LOC142178563 LOC107831783
Function* TBP-associated factor 11 TBP-associated factor 11-like protein transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 uncharacterized LOC7465380 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11-like transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11-like uncharacterized protein transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11 transcription initiation factor TFIID subunit 11-like transcription initiation factor TFIID subunit 11-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03083 Polycomb repressive complex 2
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
zma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04122 Sulfur relay system 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00020 Citrate cycle (TCA cycle) 3
vvi01200 Carbon metabolism 3
vvi01210 2-Oxocarboxylic acid metabolism 3
vvi03022 Basal transcription factors 3
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae04130 SNARE interactions in vesicular transport 2
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 5
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01230 Biosynthesis of amino acids 3
ghi00051 Fructose and mannose metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 5
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi00051 Fructose and mannose metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03010 Ribosome 2
sot00970 Aminoacyl-tRNA biosynthesis 2
sot04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827775 100305481 101252686 4325286 100286233 100285251 103858067 100249829 7491456 7465380 25483108 123078975 123070564 123444112 107960838 107896635 106376468 5715030 8068019 102604061 102619164 100838901 142178563 107831783
The preparation time of this page was 0.3 [sec].