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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g012450v5   uncharacterized protein 
 gma-u.5   100812184   E3 ubiquitin-protein ligase UPL1 
 gma-u.5   100802630   E3 ubiquitin-protein ligase UPL1 
 gma-u.5   100788161   E3 ubiquitin-protein ligase UPL1 
 sly-u.5   101261615   E3 ubiquitin-protein ligase UPL2 
 osa-u.5   4352108   E3 ubiquitin-protein ligase UPL2 
 zma-u.5   100384278   E3 ubiquitin-protein ligase UPL1 
 zma-u.5   103650429   E3 ubiquitin-protein ligase UPL1 
 bra-r.6   103838597   E3 ubiquitin-protein ligase UPL1 
 bra-r.6   117128071   E3 ubiquitin-protein ligase UPL1 
 bra-r.6   117128072   E3 ubiquitin-protein ligase UPL1-like 
 vvi-u.5   100255704   E3 ubiquitin-protein ligase UPL2 
 ppo-u.5   7467222   E3 ubiquitin-protein ligase UPL1 
 mtr-u.5   25489905   E3 ubiquitin-protein ligase UPL1 
 mtr-u.5   11442326   E3 ubiquitin-protein ligase UPL1 
 tae-r.2   123102925   E3 ubiquitin-protein ligase UPL2 
 tae-r.2   123110957   E3 ubiquitin-protein ligase UPL2 
 tae-r.2   123119938   E3 ubiquitin-protein ligase UPL1 
 hvu-r.1   123399924   E3 ubiquitin-protein ligase UPL1-like 
 ghi-r.1   107905142   E3 ubiquitin-protein ligase UPL2-like 
 ghi-r.1   107941551   E3 ubiquitin-protein ligase UPL1 
 ghi-r.1   107942389   E3 ubiquitin-protein ligase UPL2 
 bna-r.1   125593466   E3 ubiquitin-protein ligase UPL1-like 
 bna-r.1   106358004   E3 ubiquitin-protein ligase UPL1-like 
 sbi-r.1   8061253   E3 ubiquitin-protein ligase UPL1 
 sot-r.1   102596804   E3 ubiquitin-protein ligase UPL1-like 
 cit-r.1   102609169   E3 ubiquitin-protein ligase UPL2-like 
 bdi-r.1   100821130   E3 ubiquitin-protein ligase UPL1 
 nta-r.1   107785026   E3 ubiquitin-protein ligase UPL2 
 nta-r.1   107806692   E3 ubiquitin-protein ligase UPL2-like 

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Top 50 coexpressed genes to CHLRE_01g012450v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g012450v5 (cre-r.1 coexpression data)

CoexMap"5715054"


creCHLRE_01g012450v5 | Entrez gene ID : 5715054    
Species cre gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta ath
Paralog 1 3 1 1 2 3 1 1 2 3 1 3 2 1 1 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045732 [list] [network] positive regulation of protein catabolic process  (21 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (40 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (98 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (132 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042928247.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  golg_plas 4,  golg 1,  chlo 1,  nucl 1,  vacu 1  (predict for XP_042928247.1)
Subcellular
localization
TargetP
other 5,  scret 4  (predict for XP_042928247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g012450v5
gma-u.5
for
100812184
gma-u.5
for
100802630
gma-u.5
for
100788161
sly-u.5
for
101261615
osa-u.5
for
4352108
zma-u.5
for
100384278
zma-u.5
for
103650429
bra-r.6
for
103838597
bra-r.6
for
117128071
bra-r.6
for
117128072
vvi-u.5
for
100255704
ppo-u.5
for
7467222
mtr-u.5
for
25489905
mtr-u.5
for
11442326
tae-r.2
for
123102925
tae-r.2
for
123110957
tae-r.2
for
123119938
hvu-r.1
for
123399924
ghi-r.1
for
107905142
ghi-r.1
for
107941551
ghi-r.1
for
107942389
bna-r.1
for
125593466
bna-r.1
for
106358004
sbi-r.1
for
8061253
sot-r.1
for
102596804
cit-r.1
for
102609169
bdi-r.1
for
100821130
nta-r.1
for
107785026
nta-r.1
for
107806692


Ortholog ID: 5440
Species cre gma gma gma sly osa zma zma bra bra bra vvi ppo mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_01g012450v5 LOC100812184 LOC100802630 LOC100777899 LOC101261615 LOC4352108 LOC100384278 LOC103650429 LOC103838597 LOC117128071 LOC117128072 LOC100255704 LOC7467222 LOC25489905 LOC11442326 LOC123102925 LOC123110957 LOC123119938 LOC123399924 LOC107905142 LOC107957537 LOC107957835 LOC125593466 LOC106358004 LOC106434965 LOC8061253 LOC102596804 LOC102609169 LOC100821130 LOC107785026 LOC107806692
Function* uncharacterized protein E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL2-like E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL2-like E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL2-like E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL2 E3 ubiquitin-protein ligase UPL2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
cre03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma03040 Spliceosome 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 7
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03082 ATP-dependent chromatin remodeling 2
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03082 ATP-dependent chromatin remodeling 3
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715054 100812184 100802630 100777899 101261615 4352108 100384278 103650429 103838597 117128071 117128072 100255704 7467222 25489905 11442326 123102925 123110957 123119938 123399924 107905142 107957537 107957835 125593466 106358004 106434965 8061253 102596804 102609169 100821130 107785026 107806692
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