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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g019100v5   uncharacterized protein 
 ath-u.5   AT3G19480   D-3-phosphoglycerate dehydrogenase 
 ath-u.5   EDA9   D-3-phosphoglycerate dehydrogenase 
 ath-u.5   PGDH   D-3-phosphoglycerate dehydrogenase 
 gma-u.5   100793819   D-3-phosphoglycerate dehydrogenase 2, chloroplastic 
 gma-u.5   100806526   D-3-phosphoglycerate dehydrogenase 2, chloroplastic 
 gma-u.5   100808771   D-3-phosphoglycerate dehydrogenase 1, chloroplastic 
 sly-u.5   101246616   D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like 
 sly-u.5   101254848   D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like 
 sly-u.5   101266918   D-3-phosphoglycerate dehydrogenase 
 osa-u.5   4337230   D-3-phosphoglycerate dehydrogenase 3, chloroplastic 
 osa-u.5   4341713   D-3-phosphoglycerate dehydrogenase 3, chloroplastic 
 osa-u.5   4345710   D-3-phosphoglycerate dehydrogenase 1, chloroplastic 
 zma-u.5   100281928   uncharacterized LOC100281928 
 zma-u.5   100280735   D-3-phosphoglycerate dehydrogenase 
 zma-u.5   100280688   uncharacterized LOC100280688 
 vvi-u.5   100241666   D-3-phosphoglycerate dehydrogenase 3, chloroplastic 
 vvi-u.5   100260655   D-3-phosphoglycerate dehydrogenase 3, chloroplastic 
 vvi-u.5   100259056   D-3-phosphoglycerate dehydrogenase 3, chloroplastic 
 ppo-u.5   7490061   D-3-phosphoglycerate dehydrogenase 1, chloroplastic 
 ppo-u.5   7492063   D-3-phosphoglycerate dehydrogenase 1, chloroplastic 
 ppo-u.5   7472681   D-3-phosphoglycerate dehydrogenase 3, chloroplastic 
 mtr-u.5   25485421   D-3-phosphoglycerate dehydrogenase 1, chloroplastic 
 mtr-u.5   11434383   D-3-phosphoglycerate dehydrogenase 2, chloroplastic 

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Top 50 coexpressed genes to CHLRE_01g019100v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g019100v5 (cre-r.1 coexpression data)

CoexMap"5715172"


creCHLRE_01g019100v5 | Entrez gene ID : 5715172      
Species cre ath gma sly osa zma vvi ppo mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 3 3 3 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0051287 [list] [network] NAD binding  (49 genes)  IEA  
GO:0016616 [list] [network] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor  (88 genes)  IEA  
Protein XP_001689944.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  pero 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_001689944.2)
Subcellular
localization
TargetP
other 9  (predict for XP_001689944.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g019100v5

.
ath-u.5
for
AT3G19480

.
ath-u.5
for
EDA9

.
ath-u.5
for
PGDH

.
gma-u.5
for
100793819

.
gma-u.5
for
100806526

.
gma-u.5
for
100808771

.
sly-u.5
for
101246616

.
sly-u.5
for
101254848

.
sly-u.5
for
101266918

.
osa-u.5
for
4337230

.
osa-u.5
for
4341713

.
osa-u.5
for
4345710

.
zma-u.5
for
100281928

.
zma-u.5
for
100280735

.
zma-u.5
for
100280688

.
vvi-u.5
for
100241666

.
vvi-u.5
for
100260655

.
vvi-u.5
for
100259056

.
ppo-u.5
for
7490061

.
ppo-u.5
for
7492063

.
ppo-u.5
for
7472681

.
mtr-u.5
for
25485421

.
mtr-u.5
for
11434383

.


Ortholog ID: 1174
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol EDA9 PGDH LOC100817949 LOC100819264 LOC101246616 LOC101254848 LOC4337230 LOC4345710 LOC100281928 LOC100280688 LOC103835943 LOC103862328 LOC100241666 LOC100260655 LOC18104837 LOC7490061 LOC25485421 LOC11434383 LOC123052547 LOC123159608 LOC123428120 LOC123408590 LOC107894299 LOC107938153 LOC106358583 LOC111207771 CHLRE_07g324550v5 CHLRE_07g344600v5 LOC8077869 LOC8079596 LOC102580248 LOC102591151 LOC102621273 LOC102609596 LOC100823115 LOC100841053 LOC107832592 LOC107808555
Function* D-3-phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase 2, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 1, chloroplastic uncharacterized LOC100281928 uncharacterized LOC100280688 D-3-phosphoglycerate dehydrogenase 2, chloroplastic D-3-phosphoglycerate dehydrogenase 1, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 1, chloroplastic D-3-phosphoglycerate dehydrogenase 1, chloroplastic D-3-phosphoglycerate dehydrogenase 2, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like D-3-phosphoglycerate dehydrogenase 1, chloroplastic D-3-phosphoglycerate dehydrogenase 2, chloroplastic D-3-phosphoglycerate dehydrogenase 1, chloroplastic uncharacterized protein uncharacterized protein D-3-phosphoglycerate dehydrogenase 2, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like D-3-phosphoglycerate dehydrogenase 1, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 3, chloroplastic D-3-phosphoglycerate dehydrogenase 1, chloroplastic D-3-phosphoglycerate dehydrogenase 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 13
ath01230 Biosynthesis of amino acids 13
ath00010 Glycolysis / Gluconeogenesis 10
ath00710 Carbon fixation by Calvin cycle 5
ath00260 Glycine, serine and threonine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath01230 Biosynthesis of amino acids 6
ath00270 Cysteine and methionine metabolism 5
ath00260 Glycine, serine and threonine metabolism 4
ath00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 7
gma01230 Biosynthesis of amino acids 6
gma00270 Cysteine and methionine metabolism 5
gma01200 Carbon metabolism 5
gma00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 3
gma00270 Cysteine and methionine metabolism 3
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly04141 Protein processing in endoplasmic reticulum 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 10
sly01230 Biosynthesis of amino acids 8
sly00010 Glycolysis / Gluconeogenesis 4
sly00670 One carbon pool by folate 4
sly00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 6
osa01200 Carbon metabolism 5
osa00620 Pyruvate metabolism 3
osa00480 Glutathione metabolism 2
osa00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa01230 Biosynthesis of amino acids 6
osa00260 Glycine, serine and threonine metabolism 3
osa00270 Cysteine and methionine metabolism 3
osa00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 10
zma00270 Cysteine and methionine metabolism 7
zma00670 One carbon pool by folate 6
zma01200 Carbon metabolism 5
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 6
bra00966 Glucosinolate biosynthesis 6
bra01210 2-Oxocarboxylic acid metabolism 6
bra01230 Biosynthesis of amino acids 5
bra00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 9
bra00260 Glycine, serine and threonine metabolism 6
bra00270 Cysteine and methionine metabolism 5
bra01200 Carbon metabolism 5
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi00260 Glycine, serine and threonine metabolism 4
vvi01230 Biosynthesis of amino acids 4
vvi00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo00270 Cysteine and methionine metabolism 7
ppo01200 Carbon metabolism 6
ppo00260 Glycine, serine and threonine metabolism 5
ppo01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 8
mtr00270 Cysteine and methionine metabolism 7
mtr00670 One carbon pool by folate 5
mtr00260 Glycine, serine and threonine metabolism 4
mtr01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 4
tae00270 Cysteine and methionine metabolism 4
tae01200 Carbon metabolism 4
tae01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 5
tae01230 Biosynthesis of amino acids 4
tae00260 Glycine, serine and threonine metabolism 3
tae00270 Cysteine and methionine metabolism 3
tae00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 9
hvu01200 Carbon metabolism 6
hvu00220 Arginine biosynthesis 3
hvu00250 Alanine, aspartate and glutamate metabolism 3
hvu00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 7
hvu00630 Glyoxylate and dicarboxylate metabolism 6
hvu00260 Glycine, serine and threonine metabolism 5
hvu01230 Biosynthesis of amino acids 4
hvu00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi01230 Biosynthesis of amino acids 8
ghi00260 Glycine, serine and threonine metabolism 6
ghi00270 Cysteine and methionine metabolism 6
ghi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 6
ghi00270 Cysteine and methionine metabolism 6
ghi01200 Carbon metabolism 6
ghi01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 6
bna00010 Glycolysis / Gluconeogenesis 4
bna00071 Fatty acid degradation 4
bna00350 Tyrosine metabolism 4
bna00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 11
bna01230 Biosynthesis of amino acids 11
bna00260 Glycine, serine and threonine metabolism 8
bna00270 Cysteine and methionine metabolism 8
bna00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 3
cre00190 Oxidative phosphorylation 2
cre00010 Glycolysis / Gluconeogenesis 2
cre00030 Pentose phosphate pathway 2
cre00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 3
cre01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 6
sbi04517 IgSF CAM signaling 6
sbi04814 Motor proteins 6
sbi00260 Glycine, serine and threonine metabolism 3
sbi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00260 Glycine, serine and threonine metabolism 4
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi00270 Cysteine and methionine metabolism 3
sbi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 6
sot04517 IgSF CAM signaling 6
sot04814 Motor proteins 6
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 8
sot01230 Biosynthesis of amino acids 7
sot00260 Glycine, serine and threonine metabolism 6
sot00030 Pentose phosphate pathway 3
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 8
cit00196 Photosynthesis - antenna proteins 3
cit00900 Terpenoid backbone biosynthesis 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 13
cit00270 Cysteine and methionine metabolism 8
cit01200 Carbon metabolism 8
cit00670 One carbon pool by folate 6
cit00260 Glycine, serine and threonine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bdi00270 Cysteine and methionine metabolism 3
bdi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00270 Cysteine and methionine metabolism 4
nta01200 Carbon metabolism 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 9
nta01200 Carbon metabolism 6
nta00270 Cysteine and methionine metabolism 5
nta00020 Citrate cycle (TCA cycle) 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829568 838352 100817949 100819264 101246616 101254848 4337230 4345710 100281928 100280688 103835943 103862328 100241666 100260655 18104837 7490061 25485421 11434383 123052547 123159608 123428120 123408590 107894299 107938153 106358583 111207771 66053998 5718129 8077869 8079596 102580248 102591151 102621273 102609596 100823115 100841053 107832592 107808555
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