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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g025300v5   uncharacterized protein 
 sly-u.5   101253055   DNA repair protein RAD51 homolog 2 
 osa-u.5   4337655   DNA repair protein RAD51 homolog 2 
 bra-r.6   103864899   DNA repair protein RAD51 homolog 2 
 vvi-u.5   100250095   DNA repair protein RAD51 homolog 2 
 mtr-u.5   11419094   DNA repair protein RAD51 homolog 2 
 tae-r.2   123188669   DNA repair protein RAD51 homolog 2 
 hvu-r.1   123403919   DNA repair protein RAD51 homolog 2 
 bna-r.1   106450023   DNA repair protein RAD51 homolog 2 
 bna-r.1   106412083   DNA repair protein RAD51 homolog 2 
 sbi-r.1   8071245   DNA repair protein RAD51 homolog 2 
 sot-r.1   102578308   DNA repair protein RAD51 homolog 2 
 bdi-r.1   100846195   DNA repair protein RAD51 homolog 2 
 nta-r.1   107827628   DNA repair protein RAD51 homolog 2-like 
 nta-r.1   107791433   DNA repair protein RAD51 homolog 2 

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Top 50 coexpressed genes to CHLRE_01g025300v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g025300v5 (cre-r.1 coexpression data)

CoexMap"5715279"


creCHLRE_01g025300v5 | Entrez gene ID : 5715279    
Species cre sly osa bra vvi mtr tae hvu bna sbi sot bdi nta ppo zma ath gma ghi cit
Paralog 1 1 1 1 1 1 1 1 2 1 1 1 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (82 genes)  IEA  
GO CC
GO:0033063 [list] [network] Rad51B-Rad51C-Rad51D-XRCC2 complex  (4 genes)  IEA  
GO:0005657 [list] [network] replication fork  (33 genes)  IEA  
GO MF
GO:0000400 [list] [network] four-way junction DNA binding  (5 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (19 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (46 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (175 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (290 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001689995.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo 2  (predict for XP_001689995.2)
Subcellular
localization
TargetP
other 6,  mito 6  (predict for XP_001689995.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g025300v5
sly-u.5
for
101253055
osa-u.5
for
4337655
bra-r.6
for
103864899
vvi-u.5
for
100250095
mtr-u.5
for
11419094
tae-r.2
for
123188669
hvu-r.1
for
123403919
bna-r.1
for
106450023
bna-r.1
for
106412083
sbi-r.1
for
8071245
sot-r.1
for
102578308
bdi-r.1
for
100846195
nta-r.1
for
107827628
nta-r.1
for
107791433


Ortholog ID: 10681
Species cre sly osa bra vvi mtr hvu bna bna sbi sot bdi nta nta
Symbol CHLRE_01g025300v5 LOC101253055 LOC4337655 LOC103864899 LOC100250095 LOC11419094 LOC123403919 LOC106450023 LOC106412083 LOC8071245 LOC102578308 LOC100846195 LOC107827628 LOC107791433
Function* uncharacterized protein DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2-like DNA repair protein RAD51 homolog 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03440 Homologous recombination 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03440 Homologous recombination 2
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715279 101253055 4337655 103864899 100250095 11419094 123403919 106450023 106412083 8071245 102578308 100846195 107827628 107791433
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