ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_01g029050v5	uncharacterized protein
ath-u.5	AT1G61150	LisH and RanBPM domains containing protein
gma-u.5	100820568	protein GID8 homolog
gma-u.5	100787810	protein GID8 homolog
sly-u.5	101263084	protein GID8 homolog
osa-u.5	4332176	protein GID8 homolog
zma-u.5	100273042	LisH and RanBPM domains containing protein
zma-u.5	103633279	protein GID8 homolog
vvi-u.5	100260761	protein GID8 homolog
ppo-u.5	7495255	protein GID8 homolog
ppo-u.5	7490806	protein GID8 homolog
mtr-u.5	11430368	protein GID8 homolog

functional annotation

KEGG

GO BP

GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process

(98 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus	(1576 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(2907 genes)	IEA

GO MF

GO:0005515 [list] [network] protein binding

(1927 genes)

IEA

Protein

XP_001690032.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 2, mito 2, chlo_mito 2, nucl_plas 1

(predict for XP_001690032.1)

Subcellular
localization
TargetP

other 8

(predict for XP_001690032.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_01g029050v5 .	ath-u.5 for AT1G61150 .	gma-u.5 for 100820568 .	gma-u.5 for 100787810 .	sly-u.5 for 101263084 .	osa-u.5 for 4332176 .	zma-u.5 for 100273042 .	zma-u.5 for 103633279 .	vvi-u.5 for 100260761 .	ppo-u.5 for 7495255 .	ppo-u.5 for 7490806 .	mtr-u.5 for 11430368 .

Ortholog ID: 4474

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

LisH and RanBPM domains containing protein

protein GID8 homolog

LisH and RanBPM domains containing protein

protein GID8 homolog

uncharacterized protein

glucose-induced degradation protein 8 homolog

protein GID8 homolog

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	8
ath04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma03015	mRNA surveillance pathway	2
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	9
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	3
zma04016	MAPK signaling pathway - plant	2
zma04075	Plant hormone signal transduction	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	2
zma03008	Ribosome biogenesis in eukaryotes	2
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	3
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	6
bna04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04136	Autophagy - other	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	3
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	2
sot04075	Plant hormone signal transduction	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3
nta00270	Cysteine and methionine metabolism	2
nta00920	Sulfur metabolism	2
nta04122	Sulfur relay system	2
nta03250	Viral life cycle - HIV-1	2

Expression

Expression pattern

Entrez Gene ID^*

842408

100820568

100787810

101263084

4332176

103633279

100273042

103830392

103849634

100260761

7495255

7490806

11430368

123098136

123068273

123439175

123449216

107891790

107905890

106396959

106422397

5715338

8085238

102606412

102578849

102617031

100833735

107777614

107795816

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_01g029050v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_01g029050v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	vvi	ppo	mtr	sbi	nta	bra	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	1	1	2	1	1	2	1	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_01g029050v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_01g029050v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**