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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g030950v5   uncharacterized protein 
 ath-u.5   AT4G34412   EKC/KEOPS complex subunit tprkb-like protein 
 gma-u.5   100781927   EKC/KEOPS complex subunit Tprkb 
 gma-u.5   100527714   EKC/KEOPS complex subunit tprkb-like protein 
 sly-u.5   101268037   uncharacterized LOC101268037 
 osa-u.5   4325487   uncharacterized LOC4325487 
 zma-u.5   100280192   uncharacterized LOC100280192 
 vvi-u.5   100262310   uncharacterized LOC100262310 
 ppo-u.5   18097790   uncharacterized LOC18097790 
 mtr-u.5   25502232   EKC/KEOPS complex subunit Tprkb 
 mtr-u.5   25487989   EKC/KEOPS complex subunit Tprkb 

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Top 50 coexpressed genes to CHLRE_01g030950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g030950v5 (cre-r.1 coexpression data)

CoexMap"5715376"


creCHLRE_01g030950v5 | Entrez gene ID : 5715376      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000722 [list] [network] telomere maintenance via recombination  (4 genes)  IEA  
GO:0002949 [list] [network] tRNA threonylcarbamoyladenosine modification  (4 genes)  IEA  
GO CC
GO:0000408 [list] [network] EKC/KEOPS complex  (2 genes)  IEA  
GO:0005829 [list] [network] cytosol  (481 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_001689588.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 2  (predict for XP_001689588.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001689588.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g030950v5

.
ath-u.5
for
AT4G34412

.
gma-u.5
for
100781927

.
gma-u.5
for
100527714

.
sly-u.5
for
101268037

.
osa-u.5
for
4325487

.
zma-u.5
for
100280192

.
vvi-u.5
for
100262310

.
ppo-u.5
for
18097790

.
mtr-u.5
for
25502232

.
mtr-u.5
for
25487989

.


Ortholog ID: 7308
Species ath gma gma sly osa zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT4G34412 LOC100527714 LOC100781927 LOC101268037 LOC4325487 LOC100280192 LOC103838263 LOC103862349 LOC100262310 LOC18097790 LOC25502232 LOC25487989 LOC123060027 LOC123068507 LOC123442614 LOC107934109 LOC107928815 LOC111207518 CHLRE_01g030950v5 LOC110433533 LOC102598711 LOC102615258 LOC100827271 LOC107774750 LOC107773480
Function* EKC/KEOPS complex subunit tprkb-like protein EKC/KEOPS complex subunit tprkb-like protein EKC/KEOPS complex subunit Tprkb uncharacterized LOC101268037 uncharacterized LOC4325487 uncharacterized LOC100280192 EKC/KEOPS complex subunit TPRKB EKC/KEOPS complex subunit Tprkb uncharacterized LOC100262310 uncharacterized LOC18097790 EKC/KEOPS complex subunit Tprkb EKC/KEOPS complex subunit Tprkb EKC/KEOPS complex subunit TPRKB EKC/KEOPS complex subunit TPRKB EKC/KEOPS complex subunit TPRKB EKC/KEOPS complex subunit Tprkb EKC/KEOPS complex subunit TPRKB EKC/KEOPS complex subunit TPRKB-like uncharacterized protein EKC/KEOPS complex subunit TPRKB TP53RK-binding protein-like uncharacterized LOC102615258 EKC/KEOPS complex subunit TPRKB uncharacterized LOC107774750 uncharacterized LOC107773480
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03010 Ribosome 2
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03022 Basal transcription factors 2
mtr03420 Nucleotide excision repair 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 2
tae00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03010 Ribosome 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
bna03018 RNA degradation 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829592 100527714 100781927 101268037 4325487 100280192 103838263 103862349 100262310 18097790 25502232 25487989 123060027 123068507 123442614 107934109 107928815 111207518 5715376 110433533 102598711 102615258 100827271 107774750 107773480
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