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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g042550v5   uncharacterized protein 
 ath-u.5   AT5G11560   catalytics 
 gma-u.5   100807708   ER membrane protein complex subunit 1 
 gma-u.5   100790095   ER membrane protein complex subunit 1 
 sly-u.5   101252322   uncharacterized LOC101252322 
 osa-u.5   4338159   uncharacterized LOC4338159 
 zma-u.5   103635715   ER membrane protein complex subunit 1-like 
 zma-u.5   100381974   uncharacterized LOC100381974 
 vvi-u.5   100264673   uncharacterized LOC100264673 
 ppo-u.5   7462934   uncharacterized LOC7462934 
 ppo-u.5   7495703   uncharacterized LOC7495703 
 mtr-u.5   25490115   ER membrane protein complex subunit 1 

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Top 50 coexpressed genes to CHLRE_01g042550v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g042550v5 (cre-r.1 coexpression data)

CoexMap"5715596"


creCHLRE_01g042550v5 | Entrez gene ID : 5715596      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034975 [list] [network] protein folding in endoplasmic reticulum  (7 genes)  IEA  
GO CC
GO:0072546 [list] [network] EMC complex  (7 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042928749.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 3,  chlo 2,  extr 2,  nucl 1,  mito 1,  E.R. 1,  pero 1  (predict for XP_042928749.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_042928749.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g042550v5

.
ath-u.5
for
AT5G11560

.
gma-u.5
for
100807708

.
gma-u.5
for
100790095

.
sly-u.5
for
101252322

.
osa-u.5
for
4338159

.
zma-u.5
for
103635715

.
zma-u.5
for
100381974

.
vvi-u.5
for
100264673

.
ppo-u.5
for
7462934

.
ppo-u.5
for
7495703

.
mtr-u.5
for
25490115

.


Ortholog ID: 6346
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G11560 LOC100807708 LOC100790095 LOC101252322 LOC4338159 LOC103635715 LOC100381974 LOC103846708 LOC100264673 LOC7462934 LOC7495703 LOC25490115 LOC123116977 LOC123180745 LOC123428688 LOC107962887 LOC107901545 LOC106424608 LOC106372400 CHLRE_01g042550v5 LOC8058276 LOC102580852 LOC102616493 LOC100839696 LOC107808270 LOC107798297
Function* catalytics ER membrane protein complex subunit 1 ER membrane protein complex subunit 1 uncharacterized LOC101252322 uncharacterized LOC4338159 ER membrane protein complex subunit 1-like uncharacterized LOC100381974 ER membrane protein complex subunit 1 uncharacterized LOC100264673 uncharacterized LOC7462934 uncharacterized LOC7495703 ER membrane protein complex subunit 1 ER membrane protein complex subunit 1 ER membrane protein complex subunit 1 ER membrane protein complex subunit 1 ER membrane protein complex subunit 1 ER membrane protein complex subunit 1 ER membrane protein complex subunit 1 ER membrane protein complex subunit 1 uncharacterized protein ER membrane protein complex subunit 1 ER membrane protein complex subunit 1 uncharacterized LOC102616493 ER membrane protein complex subunit 1 uncharacterized LOC107808270 uncharacterized LOC107798297
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 10
ath00510 N-Glycan biosynthesis 7
ath00513 Various types of N-glycan biosynthesis 6
ath00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma00510 N-Glycan biosynthesis 5
gma00513 Various types of N-glycan biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00020 Citrate cycle (TCA cycle) 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly00510 N-Glycan biosynthesis 4
sly00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 7
osa00510 N-Glycan biosynthesis 6
osa00513 Various types of N-glycan biosynthesis 6
osa00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 5
zma04144 Endocytosis 4
zma05100 Bacterial invasion of epithelial cells 4
zma04141 Protein processing in endoplasmic reticulum 3
zma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 4
bra00513 Various types of N-glycan biosynthesis 4
bra04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 8
mtr00510 N-Glycan biosynthesis 5
mtr00513 Various types of N-glycan biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
tae00510 N-Glycan biosynthesis 2
tae00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae00510 N-Glycan biosynthesis 2
tae00513 Various types of N-glycan biosynthesis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu04382 Cornified envelope formation 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi04382 Cornified envelope formation 2
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta04144 Endocytosis 2
nta05100 Bacterial invasion of epithelial cells 2
nta03060 Protein export 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831028 100807708 100790095 101252322 4338159 103635715 100381974 103846708 100264673 7462934 7495703 25490115 123116977 123180745 123428688 107962887 107901545 106424608 106372400 5715596 8058276 102580852 102616493 100839696 107808270 107798297
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