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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g306300v5   uncharacterized protein 
 ath-u.5   CHLI1   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   CHLI2   magnesium chelatase i2 
 gma-u.5   100781940   magnesium-chelatase subunit ChlI, chloroplastic 
 gma-u.5   CHLI   Mg-protoporphyrin IX chelatase subunit ChlI 
 gma-u.5   100801560   magnesium-chelatase subunit ChlI, chloroplastic 
 sly-u.5   101255435   magnesium-chelatase subunit ChlI, chloroplastic 
 osa-u.5   4333259   magnesium-chelatase subunit ChlI, chloroplastic-like 
 zma-u.5   732841   oil yellow 1 
 vvi-u.5   100267459   magnesium-chelatase subunit ChlI, chloroplastic 
 ppo-u.5   7472323   magnesium-chelatase subunit ChlI, chloroplastic 
 ppo-u.5   7470229   magnesium-chelatase subunit ChlI, chloroplastic 
 mtr-u.5   25493040   magnesium-chelatase subunit ChlI, chloroplastic 
 mtr-u.5   11439308   magnesium-chelatase subunit ChlI, chloroplastic 

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Top 50 coexpressed genes to CHLRE_06g306300v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g306300v5 (cre-r.1 coexpression data)

CoexMap"5716878"


creCHLRE_06g306300v5 | Entrez gene ID : 5716878      
Species cre ath gma sly osa zma vvi ppo mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 2 3 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00860 [list] [network] Porphyrin metabolism (50 genes)
GO BP
GO:0015995 [list] [network] chlorophyll biosynthetic process  (12 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (41 genes)  IEA  
GO MF
GO:0016851 [list] [network] magnesium chelatase activity  (5 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (290 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001691232.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_001691232.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_001691232.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g306300v5

.
ath-u.5
for
CHLI1

.
ath-u.5
for
CHLI2

.
gma-u.5
for
100781940

.
gma-u.5
for
CHLI

.
gma-u.5
for
100801560

.
sly-u.5
for
101255435

.
osa-u.5
for
4333259

.
zma-u.5
for
732841

.
vvi-u.5
for
100267459

.
ppo-u.5
for
7472323

.
ppo-u.5
for
7470229

.
mtr-u.5
for
25493040

.
mtr-u.5
for
11439308

.


Ortholog ID: 5146
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre cre sbi sot cit bdi nta nta
Symbol CHLI2 CHLI1 LOC100801560 LOC100781940 LOC101255435 LOC4333259 LOC732841 LOC103860994 LOC103856423 LOC100267459 LOC7470229 LOC7472323 LOC25493040 LOC11439308 LOC123164936 LOC123156871 LOC123410133 LOC107886685 LOC121218690 LOC106381688 LOC106410621 CHLRE_12g510800v5 CHLRE_06g306300v5 LOC8079870 LOC102591731 LOC102620862 LOC100826370 LOC107764312 LOC107783891
Function* magnesium chelatase i2 P-loop containing nucleoside triphosphate hydrolases superfamily protein magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic-like oil yellow 1 magnesium-chelatase subunit ChlI-1, chloroplastic magnesium-chelatase subunit ChlI-1, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI-2, chloroplastic magnesium-chelatase subunit ChlI-1, chloroplastic uncharacterized protein uncharacterized protein magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic magnesium-chelatase subunit ChlI, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 8
ath01240 Biosynthesis of cofactors 4
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 5
ath03010 Ribosome 3
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma00010 Glycolysis / Gluconeogenesis 2
gma00051 Fructose and mannose metabolism 2
gma00052 Galactose metabolism 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00860 Porphyrin metabolism 4
gma00010 Glycolysis / Gluconeogenesis 2
gma00051 Fructose and mannose metabolism 2
gma00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 6
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 6
zma03010 Ribosome 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 6
bra01240 Biosynthesis of cofactors 4
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
bra00860 Porphyrin metabolism 4
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00860 Porphyrin metabolism 4
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo00860 Porphyrin metabolism 2
ppo00220 Arginine biosynthesis 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae00051 Fructose and mannose metabolism 2
tae00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu00860 Porphyrin metabolism 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 10
cre01240 Biosynthesis of cofactors 4
cre03060 Protein export 3
cre00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 12
cre01240 Biosynthesis of cofactors 6
cre00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot00710 Carbon fixation by Calvin cycle 3
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00620 Pyruvate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00195 Photosynthesis 2
nta00620 Pyruvate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834633 827580 100801560 100781940 101255435 4333259 732841 103860994 103856423 100267459 7470229 7472323 25493040 11439308 123164936 123156871 123410133 107886685 121218690 106381688 106410621 5716573 5716878 8079870 102591731 102620862 100826370 107764312 107783891
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