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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g190800v5   thymidylate kinase 
 ath-u.5   ZEU1   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100778161   thymidylate kinase-like protein 
 sly-u.5   101250906   thymidylate kinase 
 osa-u.5   4344056   thymidylate kinase 
 zma-u.5   103647875   thymidylate kinase 
 vvi-u.5   100245592   thymidylate kinase 
 ppo-u.5   7456211   thymidylate kinase 
 mtr-u.5   25480774   thymidylate kinase 
 mtr-u.5   11405368   thymidylate kinase 

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Top 50 coexpressed genes to CHLRE_03g190800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g190800v5 (cre-r.1 coexpression data)

CoexMap"5717528"


creCHLRE_03g190800v5 | Entrez gene ID : 5717528      
Species cre ath gma sly osa zma vvi ppo mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00240 [list] [network] Pyrimidine metabolism (36 genes)
cre01232 [list] [network] Nucleotide metabolism (44 genes)
GO BP
GO:0006227 [list] [network] dUDP biosynthetic process  (2 genes)  IEA  
GO:0006233 [list] [network] dTDP biosynthetic process  (2 genes)  IEA  
GO:0006235 [list] [network] dTTP biosynthetic process  (2 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO:0005829 [list] [network] cytosol  (481 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0004798 [list] [network] dTMP kinase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001692045.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  pero 1,  nucl 1,  cysk_nucl 1  (predict for XP_001692045.2)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_001692045.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g190800v5

.
ath-u.5
for
ZEU1

.
gma-u.5
for
100778161

.
sly-u.5
for
101250906

.
osa-u.5
for
4344056

.
zma-u.5
for
103647875

.
vvi-u.5
for
100245592

.
ppo-u.5
for
7456211

.
mtr-u.5
for
25480774

.
mtr-u.5
for
11405368

.


Ortholog ID: 7770
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna cre cre sbi sot cit bdi nta nta
Symbol ZEU1 LOC100778161 LOC101250906 LOC4344056 LOC103647875 LOC103845368 LOC100245592 LOC7456211 LOC11405368 LOC25480774 LOC123187795 LOC123051913 LOC123425079 LOC107953926 LOC107912769 LOC106420380 CHLRE_03g190750v5 CHLRE_03g190800v5 LOC8063548 LOC102597929 LOC102613130 LOC100846276 LOC107767328 LOC107818071
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein thymidylate kinase-like protein thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase-like thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase thymidylate kinase-like thymidylate kinase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03082 ATP-dependent chromatin remodeling 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 6
sly00240 Pyrimidine metabolism 5
sly01232 Nucleotide metabolism 5
sly03460 Fanconi anemia pathway 3
sly03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi01232 Nucleotide metabolism 2
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01232 Nucleotide metabolism 3
mtr00020 Citrate cycle (TCA cycle) 3
mtr01200 Carbon metabolism 3
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03008 Ribosome biogenesis in eukaryotes 6
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04070 Phosphatidylinositol signaling system 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01232 Nucleotide metabolism 8
bna00230 Purine metabolism 7
bna00250 Alanine, aspartate and glutamate metabolism 7
bna01240 Biosynthesis of cofactors 7
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi04120 Ubiquitin mediated proteolysis 4
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 4
sot03410 Base excision repair 3
sot03420 Nucleotide excision repair 3
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01210 2-Oxocarboxylic acid metabolism 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 8
nta01232 Nucleotide metabolism 8
nta00230 Purine metabolism 6
nta00480 Glutathione metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 8
nta01232 Nucleotide metabolism 8
nta00230 Purine metabolism 6
nta00480 Glutathione metabolism 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836063 100778161 101250906 4344056 103647875 103845368 100245592 7456211 11405368 25480774 123187795 123051913 123425079 107953926 107912769 106420380 5717527 5717528 8063548 102597929 102613130 100846276 107767328 107818071
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