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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g191150v5   uncharacterized protein 
 ath-u.5   AT1G14570   UBX domain-containing protein 
 gma-u.5   100795411   plant UBX domain-containing protein 7 
 gma-u.5   100780532   plant UBX domain-containing protein 7 
 sly-u.5   101254474   plant UBX domain-containing protein 7 
 osa-u.5   4337356   plant UBX domain-containing protein 7 
 zma-u.5   103645784   plant UBX domain-containing protein 7 
 zma-u.5   100384688   uncharacterized LOC100384688 
 vvi-u.5   100247740   plant UBX domain-containing protein 7 
 ppo-u.5   7457839   plant UBX domain-containing protein 7 
 ppo-u.5   7462631   plant UBX domain-containing protein 7 
 mtr-u.5   11421040   plant UBX domain-containing protein 7 
 mtr-u.5   11446508   plant UBX domain-containing protein 7 
 mtr-u.5   11430917   plant UBX domain-containing protein 7 

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Top 50 coexpressed genes to CHLRE_03g191150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g191150v5 (cre-r.1 coexpression data)

CoexMap"5717535"


creCHLRE_03g191150v5 | Entrez gene ID : 5717535      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (98 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (51 genes)  IEA  
Protein XP_001691879.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_001691879.1)
Subcellular
localization
TargetP
scret 7,  other 6  (predict for XP_001691879.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g191150v5

.
ath-u.5
for
AT1G14570

.
gma-u.5
for
100795411

.
gma-u.5
for
100780532

.
sly-u.5
for
101254474

.
osa-u.5
for
4337356

.
zma-u.5
for
103645784

.
zma-u.5
for
100384688

.
vvi-u.5
for
100247740

.
ppo-u.5
for
7457839

.
ppo-u.5
for
7462631

.
mtr-u.5
for
11421040

.
mtr-u.5
for
11446508

.
mtr-u.5
for
11430917

.


Ortholog ID: 3477
Species ath gma gma sly osa zma zma vvi ppo ppo mtr mtr tae tae hvu ghi ghi cre sbi sot cit bdi
Symbol AT1G14570 LOC100795411 LOC100780532 LOC101254474 LOC4337356 LOC103645784 LOC100384688 LOC100247740 LOC7457839 LOC7462631 LOC11430917 LOC11421040 LOC123055131 LOC123047330 LOC123428400 LOC107909936 LOC107959976 CHLRE_03g191150v5 LOC8070305 LOC102591255 LOC102611052 LOC100839367
Function* UBX domain-containing protein plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 uncharacterized LOC100384688 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 uncharacterized protein plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7 plant UBX domain-containing protein 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 7
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04130 SNARE interactions in vesicular transport 2
gma04144 Endocytosis 2
gma04517 IgSF CAM signaling 2
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 7
zma04075 Plant hormone signal transduction 4
zma04141 Protein processing in endoplasmic reticulum 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
tae00330 Arginine and proline metabolism 2
tae00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 5
bdi04144 Endocytosis 2
bdi04517 IgSF CAM signaling 2
bdi05100 Bacterial invasion of epithelial cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838019 100795411 100780532 101254474 4337356 103645784 100384688 100247740 7457839 7462631 11430917 11421040 123055131 123047330 123428400 107909936 107959976 5717535 8070305 102591255 102611052 100839367
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