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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g349300v5   uncharacterized protein 
 ath-u.5   EMB1586   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100812968   DEAD-box ATP-dependent RNA helicase 47, mitochondrial 
 gma-u.5   100790663   DEAD-box ATP-dependent RNA helicase 47A 
 sly-u.5   101267334   DEAD-box ATP-dependent RNA helicase 47, mitochondrial 
 osa-u.5   4330083   DEAD-box ATP-dependent RNA helicase 47A-like 
 osa-u.5   4332087   DEAD-box ATP-dependent RNA helicase 47B-like 
 zma-u.5   100191447   uncharacterized LOC100191447 
 vvi-u.5   100252990   DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like 
 ppo-u.5   7479268   DEAD-box ATP-dependent RNA helicase 47, mitochondrial 
 mtr-u.5   25486880   DEAD-box ATP-dependent RNA helicase 47B 

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Top 50 coexpressed genes to CHLRE_07g349300v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g349300v5 (cre-r.1 coexpression data)

CoexMap"5718168"


creCHLRE_07g349300v5 | Entrez gene ID : 5718168    
Species cre ath gma sly osa zma vvi ppo mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (44 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042923094.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  pero 4,  cyto_pero 4  (predict for XP_042923094.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_042923094.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g349300v5

.
ath-u.5
for
EMB1586

.
gma-u.5
for
100812968

.
gma-u.5
for
100790663

.
sly-u.5
for
101267334

.
osa-u.5
for
4330083

.
osa-u.5
for
4332087

.
zma-u.5
for
100191447

.
vvi-u.5
for
100252990

.
ppo-u.5
for
7479268

.
mtr-u.5
for
25486880

.


Ortholog ID: 9773
Species ath gma gma sly osa osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EMB1586 LOC100790663 LOC100812968 LOC101267334 LOC4332087 LOC4330083 LOC100191447 LOC103836143 LOC100252990 LOC7479268 LOC25486880 LOC123127816 LOC123137581 LOC123406155 LOC107930031 LOC107927007 LOC106382377 LOC106362041 CHLRE_07g349300v5 LOC8074797 LOC102582232 LOC102620822 LOC100824291 LOC107781890 LOC107775042
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 47A DEAD-box ATP-dependent RNA helicase 47, mitochondrial DEAD-box ATP-dependent RNA helicase 47, mitochondrial DEAD-box ATP-dependent RNA helicase 47B-like DEAD-box ATP-dependent RNA helicase 47A-like uncharacterized LOC100191447 DEAD-box ATP-dependent RNA helicase 47, mitochondrial DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like DEAD-box ATP-dependent RNA helicase 47, mitochondrial DEAD-box ATP-dependent RNA helicase 47B DEAD-box ATP-dependent RNA helicase 47A DEAD-box ATP-dependent RNA helicase 47A DEAD-box ATP-dependent RNA helicase 47A DEAD-box ATP-dependent RNA helicase 47, mitochondrial DEAD-box ATP-dependent RNA helicase 47, mitochondrial DEAD-box ATP-dependent RNA helicase 47, mitochondrial DEAD-box ATP-dependent RNA helicase 47, mitochondrial uncharacterized protein DEAD-box ATP-dependent RNA helicase 47A DEAD-box ATP-dependent RNA helicase 47, mitochondrial DEAD-box ATP-dependent RNA helicase 47A DEAD-box ATP-dependent RNA helicase 47A DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like DEAD-box ATP-dependent RNA helicase 47, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00561 Glycerolipid metabolism 2
gma00566 Sulfoquinovose metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 4
tae01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu00300 Lysine biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 4
sbi01240 Biosynthesis of cofactors 4
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 3
nta00730 Thiamine metabolism 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837833 100790663 100812968 101267334 4332087 4330083 100191447 103836143 100252990 7479268 25486880 123127816 123137581 123406155 107930031 107927007 106382377 106362041 5718168 8074797 102582232 102620822 100824291 107781890 107775042
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