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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_14g633500v5   uncharacterized protein 
 ath-u.5   AT1G73930   polarity axis stabilization protein 
 gma-u.5   100790861   protein DENND6A 
 gma-u.5   100782429   protein DENND6A 
 gma-u.5   100780852   protein DENND6A 
 sly-u.5   101259624   uncharacterized LOC101259624 
 osa-u.5   4332314   uncharacterized LOC4332314 
 zma-u.5   103633980   protein DENND6B 
 vvi-u.5   100257778   uncharacterized LOC100257778 
 ppo-u.5   7487092   uncharacterized LOC7487092 
 ppo-u.5   7475622   uncharacterized LOC7475622 
 mtr-u.5   112419298   protein DENND6A 

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Top 50 coexpressed genes to CHLRE_14g633500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_14g633500v5 (cre-r.1 coexpression data)

CoexMap"5718329"


creCHLRE_14g633500v5 | Entrez gene ID : 5718329    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0055037 [list] [network] recycling endosome  (6 genes)  IEA  
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (25 genes)  IEA  
Protein XP_042917136.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  cysk_nucl 3  (predict for XP_042917136.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042917136.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_14g633500v5

.
ath-u.5
for
AT1G73930

.
gma-u.5
for
100790861

.
gma-u.5
for
100782429

.
gma-u.5
for
100780852

.
sly-u.5
for
101259624

.
osa-u.5
for
4332314

.
zma-u.5
for
103633980

.
vvi-u.5
for
100257778

.
ppo-u.5
for
7487092

.
ppo-u.5
for
7475622

.
mtr-u.5
for
112419298

.


Ortholog ID: 7853
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G73930 LOC100780852 LOC100790861 LOC101259624 LOC4332314 LOC103633980 LOC103852870 LOC100257778 LOC7487092 LOC7475622 LOC112419298 LOC123085343 LOC123097999 LOC123449105 LOC123426580 LOC107924277 LOC107904645 LOC106381361 LOC125587337 CHLRE_14g633500v5 LOC8078824 LOC102604805 LOC102615439 LOC104581817 LOC107761152 LOC107824525
Function* polarity axis stabilization protein protein DENND6A protein DENND6A uncharacterized LOC101259624 uncharacterized LOC4332314 protein DENND6B protein DENND6A uncharacterized LOC100257778 uncharacterized LOC7487092 uncharacterized LOC7475622 protein DENND6A protein DENND6B protein DENND6B protein DENND6B uncharacterized LOC123426580 protein DENND6A protein DENND6A protein DENND6A-like protein DENND6A-like uncharacterized protein protein DENND6B protein DENND6A uncharacterized LOC102615439 protein DENND6B uncharacterized LOC107761152 uncharacterized LOC107824525
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 4
ath03018 RNA degradation 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
mtr03050 Proteasome 3
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01240 Biosynthesis of cofactors 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01240 Biosynthesis of cofactors 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta04382 Cornified envelope formation 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843730 100780852 100790861 101259624 4332314 103633980 103852870 100257778 7487092 7475622 112419298 123085343 123097999 123449105 123426580 107924277 107904645 106381361 125587337 5718329 8078824 102604805 102615439 104581817 107761152 107824525
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