Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_14g632783v5   uncharacterized protein 
 ath-u.5   CYCH;1   cyclin H;1 
 gma-u.5   547736   cyclin-H1-1 
 gma-u.5   100800023   cyclin-H1-1 
 gma-u.5   100790589   cyclin-H1-1 
 sly-u.5   101248768   cyclin-H1-1 
 sly-u.5   101246966   cyclin-H1-1 
 osa-u.5   4334040   cyclin-H1-1-like 
 zma-u.5   100283483   uncharacterized LOC100283483 
 vvi-u.5   100252789   cyclin-H1-1 
 ppo-u.5   18098692   cyclin-H1-1 
 mtr-u.5   11415666   cyclin-H1-1 

close


Top 50 coexpressed genes to CHLRE_14g632783v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_14g632783v5 (cre-r.1 coexpression data)

CoexMap"5718336"


creCHLRE_14g632783v5 | Entrez gene ID : 5718336    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000079 [list] [network] regulation of cyclin-dependent protein serine/threonine kinase activity  (12 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (190 genes)  IEA  
GO CC
GO:0070985 [list] [network] transcription factor TFIIK complex  (3 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity  (15 genes)  IEA  
Protein XP_042917115.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  nucl 1  (predict for XP_042917115.1)
Subcellular
localization
TargetP
mito 9,  other 3  (predict for XP_042917115.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_14g632783v5

.
ath-u.5
for
CYCH;1

.
gma-u.5
for
547736

.
gma-u.5
for
100800023

.
gma-u.5
for
100790589

.
sly-u.5
for
101248768

.
sly-u.5
for
101246966

.
osa-u.5
for
4334040

.
zma-u.5
for
100283483

.
vvi-u.5
for
100252789

.
ppo-u.5
for
18098692

.
mtr-u.5
for
11415666

.


Ortholog ID: 3843
Species ath gma gma sly sly osa zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna cre sbi sot sot cit bdi nta nta
Symbol CYCH;1 LOC100800023 LOC100790589 LOC101248768 LOC101246966 LOC4334040 LOC100283483 LOC103854664 LOC100252789 LOC18098692 LOC11415666 LOC123086938 LOC123091038 LOC123447709 LOC123409592 LOC107927309 LOC107915052 LOC111200847 CHLRE_14g632783v5 LOC8060506 LOC102603534 LOC102594849 LOC102628605 LOC100830061 LOC107783076 LOC107795645
Function* cyclin H;1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1-like uncharacterized LOC100283483 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1-like cyclin-H1-1 cyclin-H1-1 cyclin-H1-1-like uncharacterized protein cyclin-H1-1 cyclin-H1-1-like cyclin-H1-1-like cyclin-H1-1 cyclin-H1-1 cyclin-H1-1 cyclin-H1-1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03022 Basal transcription factors 2
gma03420 Nucleotide excision repair 2
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 7
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 2
sly03460 Fanconi anemia pathway 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
zma03022 Basal transcription factors 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03420 Nucleotide excision repair 3
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03010 Ribosome 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03040 Spliceosome 3
hvu03460 Fanconi anemia pathway 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 11
ghi03420 Nucleotide excision repair 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 11
ghi03420 Nucleotide excision repair 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi03022 Basal transcription factors 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00340 Histidine metabolism 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832824 100800023 100790589 101248768 101246966 4334040 100283483 103854664 100252789 18098692 11415666 123086938 123091038 123447709 123409592 107927309 107915052 111200847 5718336 8060506 102603534 102594849 102628605 100830061 107783076 107795645
The preparation time of this page was 0.1 [sec].