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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_14g630907v5   uncharacterized protein 
 ath-u.5   APG5   autophagy protein Apg5 family 
 gma-u.5   732567   autophagy protein 5 
 gma-u.5   100789045   autophagy protein 5-like 
 sly-u.5   101261376   autophagy protein 5 
 osa-u.5   4328092   autophagy protein 5-like 
 zma-u.5   732728   autophagy protein 5 
 bra-r.6   103851096   autophagy protein 5 
 bra-r.6   103846258   autophagy protein 5 
 vvi-u.5   100249011   autophagy protein 5 
 ppo-u.5   18106547   autophagy protein 5 
 mtr-u.5   11433638   autophagy protein 5 
 tae-r.2   123143250   autophagy protein 5 
 tae-r.2   123135681   autophagy protein 5 
 hvu-r.1   123404925   autophagy protein 5 
 hvu-r.1   123425807   autophagy protein 5-like 
 ghi-r.1   107912876   autophagy protein 5 
 ghi-r.1   107895214   autophagy protein 5 
 bna-r.1   125600735   autophagy protein 5-like 
 bna-r.1   106387717   autophagy protein 5 
 bna-r.1   106366714   autophagy protein 5-like 
 sbi-r.1   8068230   autophagy protein 5 
 sot-r.1   102601732   autophagy protein 5 
 cit-r.1   102615657   autophagy protein 5 
 bdi-r.1   100834025   autophagy protein 5 
 nta-r.1   107810645   autophagy protein 5 
 nta-r.1   142161782   autophagy protein 5-like 

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Top 50 coexpressed genes to CHLRE_14g630907v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_14g630907v5 (cre-r.1 coexpression data)

CoexMap"5718354"


creCHLRE_14g630907v5 | Entrez gene ID : 5718354    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 2 1 1 1 2 2 2 3 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006501 [list] [network] C-terminal protein lipidation  (3 genes)  IEA  
GO:0006995 [list] [network] cellular response to nitrogen starvation  (4 genes)  IEA  
GO:0044804 [list] [network] nucleophagy  (9 genes)  IEA  
GO:0000422 [list] [network] autophagy of mitochondrion  (12 genes)  IEA  
GO:0000045 [list] [network] autophagosome assembly  (17 genes)  IEA  
GO CC
GO:0034274 [list] [network] Atg12-Atg5-Atg16 complex  (2 genes)  IEA  
GO:0034045 [list] [network] phagophore assembly site membrane  (5 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
Protein XP_042917070.1 [sequence] [blastp]
XP_042917071.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_042917070.1)
nucl 9,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_042917071.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_042917070.1)
other 6,  chlo 4  (predict for XP_042917071.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_14g630907v5
ath-u.5
for
APG5
gma-u.5
for
732567
gma-u.5
for
100789045
sly-u.5
for
101261376
osa-u.5
for
4328092
zma-u.5
for
732728
bra-r.6
for
103851096
bra-r.6
for
103846258
vvi-u.5
for
100249011
ppo-u.5
for
18106547
mtr-u.5
for
11433638
tae-r.2
for
123143250
tae-r.2
for
123135681
hvu-r.1
for
123404925
hvu-r.1
for
123425807
ghi-r.1
for
107912876
ghi-r.1
for
107895214
bna-r.1
for
125600735
bna-r.1
for
106387717
bna-r.1
for
106366714
sbi-r.1
for
8068230
sot-r.1
for
102601732
cit-r.1
for
102615657
bdi-r.1
for
100834025
nta-r.1
for
107810645
nta-r.1
for
142161782


Ortholog ID: 7722
Species cre ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_14g630907v5 APG5 LOC732567 LOC100789045 LOC101261376 LOC4328092 LOC732728 LOC103851096 LOC103846258 LOC100249011 LOC18106547 LOC11433638 LOC123143250 LOC123135681 LOC123404925 LOC123425807 LOC107912876 LOC107895214 LOC125600735 LOC106387717 LOC125582351 LOC8068230 LOC102601732 LOC102615657 LOC100834025 LOC107810645 LOC142161782
Function* uncharacterized protein autophagy protein Apg5 family autophagy protein 5 autophagy protein 5-like autophagy protein 5 autophagy protein 5-like autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5-like autophagy protein 5 autophagy protein 5 autophagy protein 5-like autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5 autophagy protein 5-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
tae00500 Starch and sucrose metabolism 2
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04136 Autophagy - other 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 6
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 6
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718354 831594 732567 100789045 101261376 4328092 732728 103851096 103846258 100249011 18106547 11433638 123143250 123135681 123404925 123425807 107912876 107895214 125600735 106387717 125582351 8068230 102601732 102615657 100834025 107810645 142161782
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