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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g204900v5   uncharacterized protein 
 ath-u.5   AT3G13226   regulatory protein RecX family protein 
 gma-u.5   100803154   regulatory protein RecX 
 gma-u.5   100783629   regulatory protein RecX 
 sly-u.5   101244505   uncharacterized LOC101244505 
 osa-u.5   4337332   uncharacterized LOC4337332 
 zma-u.5   103642174   regulatory protein RecX family protein 
 bra-r.6   103849756   uncharacterized LOC103849756 
 vvi-u.5   100251420   uncharacterized LOC100251420 
 ppo-u.5   7457646   uncharacterized LOC7457646 
 mtr-u.5   11442334   regulatory protein RecX 
 tae-r.2   123190929   regulatory protein RecX 
 tae-r.2   123055075   regulatory protein RecX 
 tae-r.2   123047277   regulatory protein RecX 
 hvu-r.1   123428298   regulatory protein RecX 
 ghi-r.1   107931152   uncharacterized LOC107931152 
 ghi-r.1   107903420   uncharacterized LOC107903420 
 bna-r.1   106377525   uncharacterized LOC106377525 
 bna-r.1   111202410   uncharacterized LOC111202410 
 sbi-r.1   8082572   regulatory protein RecX 
 sot-r.1   102602812   regulatory protein RecX 
 cit-r.1   102612264   uncharacterized LOC102612264 
 bdi-r.1   100829966   regulatory protein RecX 
 nta-r.1   107820300   uncharacterized LOC107820300 
 nta-r.1   107766517   uncharacterized LOC107766517 

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Top 50 coexpressed genes to CHLRE_03g204900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g204900v5 (cre-r.1 coexpression data)

CoexMap"5718860"


creCHLRE_03g204900v5 | Entrez gene ID : 5718860      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006282 [list] [network] regulation of DNA repair  (5 genes)  IEA  
GO CC
GO MF
Protein XP_001693331.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_001693331.2)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for XP_001693331.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g204900v5
ath-u.5
for
AT3G13226
gma-u.5
for
100803154
gma-u.5
for
100783629
sly-u.5
for
101244505
osa-u.5
for
4337332
zma-u.5
for
103642174
bra-r.6
for
103849756
vvi-u.5
for
100251420
ppo-u.5
for
7457646
mtr-u.5
for
11442334
tae-r.2
for
123190929
tae-r.2
for
123055075
tae-r.2
for
123047277
hvu-r.1
for
123428298
ghi-r.1
for
107931152
ghi-r.1
for
107903420
bna-r.1
for
106377525
bna-r.1
for
111202410
sbi-r.1
for
8082572
sot-r.1
for
102602812
cit-r.1
for
102612264
bdi-r.1
for
100829966
nta-r.1
for
107820300
nta-r.1
for
107766517


Ortholog ID: 10078
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_03g204900v5 AT3G13226 LOC100803154 LOC100783629 LOC101244505 LOC4337332 LOC103642174 LOC103849756 LOC100251420 LOC7457646 LOC11442334 LOC123190929 LOC123055075 LOC123047277 LOC123428298 LOC107931152 LOC107903420 LOC106377525 LOC111202410 LOC8082572 LOC102602812 LOC102612264 LOC100829966 LOC107820300 LOC107766517
Function* uncharacterized protein regulatory protein RecX family protein regulatory protein RecX regulatory protein RecX uncharacterized LOC101244505 uncharacterized LOC4337332 regulatory protein RecX family protein uncharacterized LOC103849756 uncharacterized LOC100251420 uncharacterized LOC7457646 regulatory protein RecX regulatory protein RecX regulatory protein RecX regulatory protein RecX regulatory protein RecX uncharacterized LOC107931152 uncharacterized LOC107903420 uncharacterized LOC106377525 uncharacterized LOC111202410 regulatory protein RecX regulatory protein RecX uncharacterized LOC102612264 regulatory protein RecX uncharacterized LOC107820300 uncharacterized LOC107766517
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 4
mtr01240 Biosynthesis of cofactors 3
mtr01232 Nucleotide metabolism 2
mtr00220 Arginine biosynthesis 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00564 Glycerophospholipid metabolism 2
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00230 Purine metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00785 Lipoic acid metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718860 820518 100803154 100783629 101244505 4337332 103642174 103849756 100251420 7457646 11442334 123190929 123055075 123047277 123428298 107931152 107903420 106377525 111202410 8082572 102602812 102612264 100829966 107820300 107766517
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