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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_13g581801v5   uncharacterized protein 
 ath-u.5   AT3G60300   RWD domain-containing protein 
 gma-u.5   100791789   E3 ubiquitin-protein ligase RNF25-like 
 sly-u.5   101256805   uncharacterized LOC101256805 
 osa-u.5   4350739   uncharacterized LOC4350739 
 zma-u.5   100282323   uncharacterized LOC100282323 
 vvi-u.5   100253028   uncharacterized LOC100253028 
 ppo-u.5   7483799   uncharacterized LOC7483799 
 mtr-u.5   25500058   uncharacterized LOC25500058 
 mtr-u.5   11409565   uncharacterized LOC11409565 

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Top 50 coexpressed genes to CHLRE_13g581801v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_13g581801v5 (cre-r.1 coexpression data)

CoexMap"5719329"


creCHLRE_13g581801v5 | Entrez gene ID : 5719329    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (136 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (65 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042917556.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  plas 1,  pero 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_042917556.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042917556.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_13g581801v5

.
ath-u.5
for
AT3G60300

.
gma-u.5
for
100791789

.
sly-u.5
for
101256805

.
osa-u.5
for
4350739

.
zma-u.5
for
100282323

.
vvi-u.5
for
100253028

.
ppo-u.5
for
7483799

.
mtr-u.5
for
25500058

.
mtr-u.5
for
11409565

.


Ortholog ID: 9547
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G60300 LOC100791789 LOC101256805 LOC4350739 LOC100282323 LOC103862892 LOC100253028 LOC7483799 LOC25500058 LOC11409565 LOC123091999 LOC123097419 LOC123448484 LOC107945567 LOC111215144 LOC106445103 CHLRE_13g581801v5 LOC8071941 LOC102600249 LOC102625474 LOC100836806 LOC107759680 LOC107775072
Function* RWD domain-containing protein E3 ubiquitin-protein ligase RNF25-like uncharacterized LOC101256805 uncharacterized LOC4350739 uncharacterized LOC100282323 E3 ubiquitin-protein ligase RNF25 uncharacterized LOC100253028 uncharacterized LOC7483799 uncharacterized LOC25500058 uncharacterized LOC11409565 E3 ubiquitin-protein ligase RNF25 E3 ubiquitin-protein ligase RNF25 E3 ubiquitin-protein ligase RNF25 uncharacterized LOC107945567 E3 ubiquitin-protein ligase RNF25-like E3 ubiquitin-protein ligase RNF25 uncharacterized protein E3 ubiquitin-protein ligase RNF25 E3 ubiquitin-protein ligase RNF25 hypothetical protein E3 ubiquitin-protein ligase RNF25 uncharacterized LOC107759680 uncharacterized LOC107775072
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825201 100791789 101256805 4350739 100282323 103862892 100253028 7483799 25500058 11409565 123091999 123097419 123448484 107945567 111215144 106445103 5719329 8071941 102600249 102625474 100836806 107759680 107775072
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